RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 OR2A2Q6IF42 318 aa17.02■□□□□ 0.32
CDKN3-209ENST00000556102 CHMP1BQ7LBR1 199 aa17.02■□□□□ 0.32
CDKN3-209ENST00000556102 P4HA3Q7Z4N8 544 aa17.02■□□□□ 0.32
CDKN3-209ENST00000556102 WFDC11Q8NEX6 87 aa17.02■□□□□ 0.32
CDKN3-209ENST00000556102 ACMSDQ8TDX5 336 aa17.02■□□□□ 0.32
CDKN3-209ENST00000556102 NEUROD4Q9HD90 331 aa17.02■□□□□ 0.32
CDKN3-209ENST00000556102 BEX4Q9NWD9 120 aaPredicted RBP17.02■□□□□ 0.32
CDKN3-209ENST00000556102 TESMINQ9Y4I5 508 aa17.02■□□□□ 0.32
CDKN3-209ENST00000556102 GSTA1P08263 222 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 CD53P19397 219 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 HOXC12P31275 282 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 CPOXP36551 454 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 PCYT1AP49585 367 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 NCBP2P52298 156 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDKN3-209ENST00000556102 C2orf80Q0P641 193 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 CYP27C1Q4G0S4 372 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 SPDYAQ5MJ70 313 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 TRMT10CQ7L0Y3 403 aaKnown RBP17.01■□□□□ 0.31
CDKN3-209ENST00000556102 UBQLNLQ8IYU4 475 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 MEIOBQ8N635 442 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 OR2M3Q8NG83 312 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 CDC26Q8NHZ8 85 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 ZNF592Q92610 1267 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 DSN1Q9H410 356 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 GSTO2Q9H4Y5 243 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 SDHAF3Q9NRP4 125 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 GRID1Q9ULK0 1009 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 ABCG2Q9UNQ0 655 aa17.01■□□□□ 0.31
CDKN3-209ENST00000556102 C19orf53Q9UNZ5 99 aaPredicted RBP17.01■□□□□ 0.31
CDKN3-209ENST00000556102 EIF3LQ9Y262 564 aaKnown RBP17.01■□□□□ 0.31
CDKN3-209ENST00000556102 SLC22A20A6NK97 555 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 GOLGA8RI6L899 631 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 RIPK2O43353 540 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 FADS1O60427 444 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 SMNDC1O75940 238 aaKnown RBP eCLIP17■□□□□ 0.31
CDKN3-209ENST00000556102 JUNP05412 331 aaKnown RBP17■□□□□ 0.31
CDKN3-209ENST00000556102 HK1P19367 917 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 MC3RP41968 323 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 GANABQ14697 944 aaKnown RBP17■□□□□ 0.31
CDKN3-209ENST00000556102 PRSS53Q2L4Q9 553 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 SH2D4BQ5SQS7 431 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 RAET1LQ5VY80 246 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 FAM71E1Q6IPT2 247 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 STARD4Q96DR4 205 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 MID1IP1Q9NPA3 183 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 MIEF1Q9NQG6 463 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 TAS2R7Q9NYW3 318 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 ARID1AO14497 2285 aa17■□□□□ 0.31
CDKN3-209ENST00000556102 PSMG1O95456 288 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 NTSP30990 170 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 FOXA1P55317 472 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 EEFSECP57772 596 aaKnown RBP16.99■□□□□ 0.31
CDKN3-209ENST00000556102 FAM27E3Q08E93 113 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 DECR1Q16698 335 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 IMPG1Q17R60 797 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 VWA1Q6PCB0 445 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 TMEM107Q6UX40 140 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 BIVMQ86UB2 503 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 CNPY4Q8N129 248 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 CCNYL1Q8N7R7 359 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 CNEP1R1Q8N9A8 125 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■■■□ 23.9
CDKN3-209ENST00000556102 CCDC126Q96EE4 140 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 GLIPR2Q9H4G4 154 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 PTGES2Q9H7Z7 377 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 Q9N2J8 555 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 MYNNQ9NPC7 610 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 DDX18Q9NVP1 670 aaKnown RBP16.99■□□□□ 0.31
CDKN3-209ENST00000556102 FAM120CQ9NX05 1096 aaKnown RBP16.99■□□□□ 0.31
CDKN3-209ENST00000556102 MED11Q9P086 117 aa16.99■□□□□ 0.31
CDKN3-209ENST00000556102 PSMC3IPQ9P2W1 217 aaPredicted RBP16.99■□□□□ 0.31
CDKN3-209ENST00000556102 WBP11Q9Y2W2 641 aaKnown RBP16.99■□□□□ 0.31
CDKN3-209ENST00000556102 LINC01387J3KSC0 135 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 UBFD1O14562 309 aaKnown RBP16.98■□□□□ 0.31
CDKN3-209ENST00000556102 CTIFO43310 598 aaKnown RBP16.98■□□□□ 0.31
CDKN3-209ENST00000556102 TNFRSF21O75509 655 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 PYGBP11216 843 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 CD79BP40259 229 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 CLDN15P56746 228 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 NAA20P61599 178 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 STX5Q13190 355 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 ZNHIT3Q15649 155 aaPredicted RBP16.98■□□□□ 0.31
CDKN3-209ENST00000556102 BTLAQ7Z6A9 289 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 KRTAP1-3Q8IUG1 177 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 OR2L13Q8N349 312 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 FAM76AQ8TAV0 307 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 FIG4Q92562 907 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 C18orf12Q96KH6 178 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 FLRT3Q9NZU0 649 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 DCDC2Q9UHG0 476 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 MRTO4Q9UKD2 239 aaKnown RBP16.98■□□□□ 0.31
CDKN3-209ENST00000556102 ZNF337Q9Y3M9 751 aa16.98■□□□□ 0.31
CDKN3-209ENST00000556102 POLR3HQ9Y535 204 aaPredicted RBP16.98■□□□□ 0.31
CDKN3-209ENST00000556102 OR2M5A3KFT3 312 aa16.97■□□□□ 0.31
CDKN3-209ENST00000556102 H3BQF6 201 aa16.97■□□□□ 0.31
CDKN3-209ENST00000556102 UPK1AO00322 258 aa16.97■□□□□ 0.31
CDKN3-209ENST00000556102 IL33O95760 270 aa16.97■□□□□ 0.31
CDKN3-209ENST00000556102 KIR2DL2P43627 348 aaPredicted RBP16.97■□□□□ 0.31
CDKN3-209ENST00000556102 CLK3P49761 638 aaKnown RBP16.97■□□□□ 0.31
CDKN3-209ENST00000556102 SUCLG1P53597 346 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms