RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SNTA1Q13424 505 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 EFR3AQ14156 821 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 MLC1Q15049 377 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 DUSP5Q16690 384 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 SMU1Q2TAY7 513 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 PGS1Q32NB8 556 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 OR4F3Q6IEY1 312 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 ZNF585AQ6P3V2 769 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 APOOLQ6UXV4 268 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 RPTNQ6XPR3 784 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 WDR75Q8IWA0 830 aaKnown RBP12.46□□□□□ -0.41
SNX6-203ENST00000555416 CLECL1Q8IZS7 167 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 CLEC4FQ8N1N0 589 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 FAM83FQ8NEG4 500 aaPredicted RBP12.46□□□□□ -0.41
SNX6-203ENST00000555416 OR1J4Q8NGS1 313 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 PHF10Q8WUB8 498 aaKnown RBP12.46□□□□□ -0.41
SNX6-203ENST00000555416 TMCO6Q96DC7 493 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 RMND5BQ96G75 393 aaPredicted RBP12.46□□□□□ -0.41
SNX6-203ENST00000555416 TEX37Q96LM6 180 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 TP63Q9H3D4 680 aaPredicted RBP12.46□□□□□ -0.41
SNX6-203ENST00000555416 EXO5Q9H790 373 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 MANSC1Q9H8J5 431 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 Q9N2J8 555 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 THAP1Q9NVV9 213 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 B4GALT7Q9UBV7 327 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 ACAD8Q9UKU7 415 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 WIF1Q9Y5W5 379 aa12.46□□□□□ -0.41
SNX6-203ENST00000555416 GOLGA8QA0A0J9YX86 632 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 GOLGA8OA6NCC3 632 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 C9JVG2 144 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 PRSS44E7EML9 344 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 GOLGA8NF8WBI6 632 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 C19orf84I3L1E1 186 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 BCKDKO14874 412 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 SCO2O43819 266 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 SNUPNO95149 360 aaKnown RBP12.45□□□□□ -0.42
SNX6-203ENST00000555416 LBPP18428 481 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 ELAVL4P26378 380 aaKnown RBP12.45□□□□□ -0.42
SNX6-203ENST00000555416 ACVR2AP27037 513 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 EPHA3P29320 983 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 EVI2BP34910 448 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 KRT20P35900 424 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 HBA1P69905 142 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 MRPS22P82650 360 aaKnown RBP12.45□□□□□ -0.42
SNX6-203ENST00000555416 CRYZQ08257 329 aaKnown RBP12.45□□□□□ -0.42
SNX6-203ENST00000555416 PMPCAQ10713 525 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 MAD2L1Q13257 205 aaPredicted RBP12.45□□□□□ -0.42
SNX6-203ENST00000555416 TOMM20Q15388 145 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 MTFR2Q6P444 385 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 CAMKMTQ7Z624 323 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 MARCH3Q86UD3 253 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 CCDC71Q8IV32 467 aaPredicted RBP12.45□□□□□ -0.42
SNX6-203ENST00000555416 OR5AK3PQ8NH89 298 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 PSMA8Q8TAA3 256 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 GPR151Q8TDV0 419 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 OR5P2Q8WZ92 322 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 SLC9A6Q92581 669 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 ZNF75CPQ92670 426 aaPredicted RBP12.45□□□□□ -0.42
SNX6-203ENST00000555416 ATP6V1G3Q96LB4 118 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 MS4A4EQ96PG1 132 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 TIMP4Q99727 224 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 SH3GL2Q99962 352 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 DUSP26Q9BV47 211 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 ZCCHC3Q9NUD5 404 aaKnown RBP12.45□□□□□ -0.42
SNX6-203ENST00000555416 SNX8Q9Y5X2 465 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 KCNE3Q9Y6H6 103 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 MAST4O15021 2626 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 PCNX3Q9H6A9 2034 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 KIAA1549Q9HCM3 1950 aa12.45□□□□□ -0.42
SNX6-203ENST00000555416 PHF3Q92576 2039 aaKnown RBP12.44□□□□□ -0.42
SNX6-203ENST00000555416 CACNA1CQ13936 2221 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 C15orf38-AP3S2A0A0A6YYH1 394 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 ZNF195O14628 629 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 HDAC3O15379 428 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 SCN2BO60939 215 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 SASH3O75995 380 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 KCNK2O95069 426 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 UTS2O95399 124 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 C1QCP02747 245 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 HMGN2P05204 90 aaKnown RBP12.44□□□□□ -0.42
SNX6-203ENST00000555416 GLI4P10075 376 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 BMP7P18075 431 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 TCEA1P23193 301 aaKnown RBP12.44□□□□□ -0.42
SNX6-203ENST00000555416 HTR1EP28566 365 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 IL12AP29459 219 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 RPL3P39023 403 aaKnown RBP12.44□□□□□ -0.42
SNX6-203ENST00000555416 ADH7P40394 386 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 CCT3P49368 545 aaKnown RBP12.44□□□□□ -0.42
SNX6-203ENST00000555416 NME5P56597 212 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 ART3Q13508 389 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 LASP1Q14847 261 aaKnown RBP12.44□□□□□ -0.42
SNX6-203ENST00000555416 ZNHIT3Q15649 155 aaPredicted RBP12.44□□□□□ -0.42
SNX6-203ENST00000555416 DECR1Q16698 335 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 GRAMD1BQ3KR37 738 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 SLC9B1Q4ZJI4 515 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 CCNJQ5T5M9 372 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 VASNQ6EMK4 673 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 OGFOD2Q6N063 350 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 FIGNL1Q6PIW4 674 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 XKRXQ6PP77 449 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms