RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 RFESDQ8TAC1 157 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 ADIPOR1Q96A54 375 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 HPDLQ96IR7 371 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 MRPL13Q9BYD1 178 aaKnown RBP4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 TIGARQ9NQ88 270 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 SLC35D1Q9NTN3 355 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 CLEC5AQ9NY25 188 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 RDH8Q9NYR8 311 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 ARMCX1Q9P291 453 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 SH3BGRL2Q9UJC5 107 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 BARX2Q9UMQ3 279 aaPredicted RBP4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 NTNG1Q9Y2I2 539 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 ATP6V0A2Q9Y487 856 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 MFHAS1Q9Y4C4 1052 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 AP4B1Q9Y6B7 739 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 PARD3Q8TEW0 1356 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 TM9SF1O15321 606 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 LCMT2O60294 686 aaKnown RBP4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 RAMP1O60894 148 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 IDH1O75874 414 aaKnown RBP4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 OR4F21O95013 312 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 PIGRP01833 764 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 IGHG3P01860 377 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 H2AFZP0C0S5 128 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 H2AFXP16104 143 aaPredicted RBP4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 HTR2AP28223 471 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 KIF5BP33176 963 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 COX10Q12887 443 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 TFDP1Q14186 410 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 TRIP10Q15642 601 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 UBE2V2Q15819 145 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 SLC39A4Q6P5W5 647 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 ZNF600Q6ZNG1 722 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 LHFPL4Q7Z7J7 247 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 STKLD1Q8NE28 680 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 OR5AU1Q8NGC0 362 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 ZNF671Q8TAW3 534 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 UPRTQ96BW1 309 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 PIWIL1Q96J94 861 aaKnown RBP4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 C1orf147Q96MC9 270 aaPredicted RBP4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 TBC1D10AQ9BXI6 508 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 NFKBIZQ9BYH8 718 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 CUTCQ9NTM9 273 aa4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 FAM120CQ9NX05 1096 aaKnown RBP4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 COL5A2P05997 1499 aaPredicted RBP4.23□□□□□ -1.73
CKS1BP1-201ENST00000555221 WDR62O43379 1518 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 TRAV9-2A0A087WT02 112 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 A0A1B0GWJ7 208 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 MAPK13O15264 365 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 PHF1O43189 567 aaPredicted RBP4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 PPIHO43447 177 aaKnown RBP4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 GPRIN2O60269 458 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 PEX11AO75192 247 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 VENTXO95231 258 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 IGFBP1P08833 259 aaPredicted RBP4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 SDC1P18827 310 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 POU3F4P49335 361 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 RPS6P62753 249 aaKnown RBP4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 LGSNQ5TDP6 509 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 SLX4IPQ5VYV7 408 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 PRSS48Q7RTY5 328 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 FADS6Q8N9I5 356 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 VN1R17PQ8TDU5 208 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 AGAP11Q8TF27 550 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 TFB1MQ8WVM0 346 aaKnown RBP4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 TSGA13Q96PP4 275 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 MCCC1Q96RQ3 725 aaPredicted RBP4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 APOL2Q9BQE5 337 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 FEM1AQ9BSK4 669 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 RIBC2Q9H4K1 309 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 EXOSC3Q9NQT5 275 aaKnown RBP4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 AGPAT5Q9NUQ2 364 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 DHRS4-AS1Q9P1J3 65 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 B9D1Q9UPM9 204 aa4.22□□□□□ -1.73
CKS1BP1-201ENST00000555221 SRRM5B3KS81 715 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 SRPX2O60687 465 aaPredicted RBP4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 CYLC1P35663 651 aaPredicted RBP4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 HMGCLP35914 325 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 ARHGDIBP52566 201 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 KLHL30Q0D2K2 578 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 LTB4RQ15722 352 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 DCST2Q5T1A1 773 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 MEDAGQ5VYS4 303 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 CBLN3Q6UW01 205 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 LRRC70Q7Z2Q7 622 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 SERINC5Q86VE9 423 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 PARGQ86W56 976 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 OR10T2Q8NGX3 314 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 TPPP3Q9BW30 176 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 GSDMCQ9BYG8 508 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 COMMD4Q9H0A8 199 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 ELOVL2Q9NXB9 296 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 CARMIL1Q5VZK9 1371 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 TOPBP1Q92547 1522 aa4.21□□□□□ -1.74
CKS1BP1-201ENST00000555221 EFCAB7A8K855 629 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 CLDN5O00501 218 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 CASKO14936 926 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms