RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PAQR3Q6TCH7 311 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 RASGEF1AQ8N9B8 481 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 KDF1Q8NAX2 398 aaPredicted RBP8.99□□□□□ -0.97
SIX4-202ENST00000554079 OR6X1Q8NH79 312 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 GPBAR1Q8TDU6 330 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 NDRG1Q92597 394 aaKnown RBP8.99□□□□□ -0.97
SIX4-202ENST00000554079 CHFRQ96EP1 664 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 MISP3Q96FF7 219 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 ARHGAP9Q9BRR9 750 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 DOHHQ9BU89 302 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 IFT27Q9BW83 186 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 TLNRD1Q9H1K6 362 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 SEMA6CQ9H3T2 930 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 FAM124BQ9H5Z6 455 aaPredicted RBP8.99□□□□□ -0.97
SIX4-202ENST00000554079 HMX1Q9NP08 348 aaPredicted RBP8.99□□□□□ -0.97
SIX4-202ENST00000554079 MED16Q9Y2X0 877 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 GREB1Q4ZG55 1949 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 FXYD6-FXYD2A0A087WZ82 144 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 TMEM129A0AVI4 362 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 BTBD17A6NE02 478 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 PRR23D1E9PI22 279 aaPredicted RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 CLIC1O00299 241 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 GABRPO00591 440 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 RFXANKO14593 260 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 PRMT3O60678 531 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 GCM2O75603 506 aaPredicted RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 HCKP08631 526 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 PRR23D2P0DMB1 279 aaPredicted RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 INSRRP14616 1297 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 IFNGR1P15260 489 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 IDSP22304 550 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 CCR7P32248 378 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 SOX18P35713 384 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 FEN1P39748 380 aaKnown RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 RAD52P43351 418 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 PPIAP62937 165 aaKnown RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 SCAPQ12770 1279 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 DYRK1AQ13627 763 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 BOP1Q14137 746 aaKnown RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 SF1Q15637 639 aaKnown RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 ZNF613Q6PF04 617 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 MPZL3Q6UWV2 235 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 ABHD15Q6UXT9 468 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 GLDNQ6ZMI3 551 aaPredicted RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 SLC29A4Q7RTT9 530 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 ZNF561Q8N587 486 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 C15orf54Q8N8G6 183 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 ZFP41Q8N8Y5 198 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 OR1S2Q8NGQ3 325 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 ACER1Q8TDN7 264 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 HIST1H2BAQ96A08 127 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 ZC3H10Q96K80 434 aaKnown RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 ZNF354BQ96LW1 612 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 OCSTAMPQ9BR26 566 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 MESP1Q9BRJ9 268 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 PDCD2LQ9BRP1 358 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 FSD1LQ9BXM9 530 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 FXYD6Q9H0Q3 95 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 JPH1Q9HDC5 661 aaPredicted RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 C2orf42Q9NWW7 574 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 ZSCAN32Q9NX65 697 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 OPN4Q9UHM6 478 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 PPT2Q9UMR5 302 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 A0A1W2PRB8 838 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 FAM221BA6H8Z2 402 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 ZNF879B4DU55 563 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 NPIPB9F8W1W9 429 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 BLOC1S5-TXNDC5H3BN57 136 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 M0QYT0 321 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 IMPA2O14732 288 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 RGS14O43566 566 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 FGF19O95750 216 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 HLA-DQB2P05538 268 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 BCKDHAP12694 445 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 RPA2P15927 270 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 CD53P19397 219 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 RAB4AP20338 218 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 AKAP5P24588 427 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 AKR1C2P52895 323 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 PNLIPRP2P54317 469 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 BLOC1S1P78537 153 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 AKR1C1Q04828 323 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 MBTD1Q05BQ5 628 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 AARDQ4LEZ3 155 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 RNASE12Q5GAN4 147 aaKnown RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 IDNKQ5T6J7 187 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 LIPJQ5W064 366 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 SLC22A10Q63ZE4 541 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 EEF1DP3Q658K8 133 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 HBMQ6B0K9 141 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 TCEAL6Q6IPX3 200 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 PRR5LQ6MZQ0 368 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 NPSR1Q6W5P4 371 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 MBOAT1Q6ZNC8 495 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 RNF165Q6ZSG1 346 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 GOLGA7Q7Z5G4 137 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 TPRA1Q86W33 373 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 THEM5Q8N1Q8 247 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 AQP11Q8NBQ7 271 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 ZNF485Q8NCK3 441 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms