RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 SORT1Q99523 831 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 BARD1Q99728 777 aaKnown RBP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 SLX1AQ9BQ83 275 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 NXF5Q9H1B4 397 aaKnown RBP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 AKTIPQ9H8T0 292 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 IL1RL2Q9HB29 575 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 FOLH1BQ9HBA9 442 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PNPOQ9NVS9 261 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ASIC5Q9NY37 505 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 KLRF1Q9NZS2 232 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 MARCOQ9UEW3 520 aaPredicted RBP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 GIMAP2Q9UG22 337 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ATP6V1HQ9UI12 483 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF639Q9UID6 485 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 HAO1Q9UJM8 370 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 SLC5A6Q9Y289 635 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 SNX8Q9Y5X2 465 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 SCN2AQ99250 2005 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 FAM166BA8MTA8 275 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 TO15178 435 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 SOX30O94993 753 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 NADKO95544 446 aaPredicted RBP7.66□□□□□ -1.18
PSEN1-209ENST00000553855 CLPSP04118 112 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 CCL3P10147 92 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 G6PDP11413 515 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 S1PR1P21453 382 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 ARRB2P32121 409 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 SOAT1P35610 550 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 PIGAP37287 484 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 RFC3P40938 356 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 DNASE1L1P49184 302 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 EMDP50402 254 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 CLDN8P56748 225 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 FBXW4P57775 412 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 KCNK10P57789 538 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 DUSP2Q05923 314 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 PDE7AQ13946 482 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 PTGR1Q14914 329 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 SLC10A1Q14973 349 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 TOMM20Q15388 145 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 DPY19L1Q2PZI1 675 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 CYP27C1Q4G0S4 372 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 TTMPQ5BVD1 217 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 ANXA8L1Q5VT79 327 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 PRAMEF20Q5VT98 475 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF324BQ6AW86 544 aaPredicted RBP7.66□□□□□ -1.18
PSEN1-209ENST00000553855 SLC30A6Q6NXT4 461 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 TMEM64Q6YI46 380 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 LARP4Q71RC2 724 aaKnown RBP eCLIP7.66□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF551Q7Z340 670 aaPredicted RBP7.66□□□□□ -1.18
PSEN1-209ENST00000553855 FAM109AQ8N4B1 249 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF441Q8N8Z8 693 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 CDRT4Q8N9R6 151 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 OR7G2Q8NG99 324 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 OR10G3Q8NGC4 313 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 OR56A1Q8NGH5 318 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 SPPL2AQ8TCT8 520 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 JADE3Q92613 823 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 NINJ1Q92982 152 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 TMBIM1Q969X1 311 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 CIDECQ96AQ7 238 aaPredicted RBP7.66□□□□□ -1.18
PSEN1-209ENST00000553855 COL21A1Q96P44 957 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 MS4A4EQ96PG1 132 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 BTBD9Q96Q07 612 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 SH3GL2Q99962 352 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 DUSP26Q9BV47 211 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 MEAF6Q9HAF1 191 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 HHATLQ9HCP6 504 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 ZFP64Q9NPA5 681 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 EQTNQ9NQ60 294 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 SDHAF3Q9NRP4 125 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 ZCCHC3Q9NUD5 404 aaKnown RBP7.66□□□□□ -1.18
PSEN1-209ENST00000553855 FAF1Q9UNN5 650 aaPredicted RBP7.66□□□□□ -1.18
PSEN1-209ENST00000553855 C19orf53Q9UNZ5 99 aaPredicted RBP7.66□□□□□ -1.18
PSEN1-209ENST00000553855 GPR55Q9Y2T6 319 aaPredicted RBP7.66□□□□□ -1.18
PSEN1-209ENST00000553855 PCDHGB3Q9Y5G1 929 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 DOCK10Q96BY6 2186 aa7.66□□□□□ -1.18
PSEN1-209ENST00000553855 UQCRHLA0A096LP55 91 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 GOLGA8QA0A0J9YX86 632 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 GOLGA8OA6NCC3 632 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 PRAMEF25A6NGN4 478 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 OR6C70A6NIJ9 312 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 GOLGA8NF8WBI6 632 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 UPK1AO00322 258 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 POLR3GO15318 223 aaPredicted RBP7.65□□□□□ -1.18
PSEN1-209ENST00000553855 LRRTM2O43300 516 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 SLC19A2O60779 497 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 DIAPH2O60879 1101 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 SNNO75324 88 aaPredicted RBP7.65□□□□□ -1.18
PSEN1-209ENST00000553855 TRAPPC6AO75865 159 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 TP53P04637 393 aaPredicted RBP7.65□□□□□ -1.18
PSEN1-209ENST00000553855 TPOP07202 933 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 ABCB1P08183 1280 aaPredicted RBP7.65□□□□□ -1.18
PSEN1-209ENST00000553855 ALOX5P09917 674 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 HPGDP15428 266 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 ELAVL4P26378 380 aaKnown RBP7.65□□□□□ -1.18
PSEN1-209ENST00000553855 MST1P26927 711 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 GDF1P27539 372 aa7.65□□□□□ -1.18
PSEN1-209ENST00000553855 EPHA3P29320 983 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms