RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 DEPDC4Q8N2C3 294 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.06□□□□□ -1.12
PRKCH-208ENST00000553846 L3MBTL4Q8NA19 623 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 ADCY4Q8NFM4 1077 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 STEAP2Q8NFT2 490 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 ZNF675Q8TD23 568 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 C1GALT1C1Q96EU7 318 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 CNRIP1Q96F85 164 aaPredicted RBP8.06□□□□□ -1.12
PRKCH-208ENST00000553846 CFAP36Q96G28 342 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 MS4A14Q96JA4 679 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 GPR22Q99680 433 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 NPAS1Q99742 590 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 CENPKQ9BS16 269 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 DSN1Q9H410 356 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 MANSC1Q9H8J5 431 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 ANKRA2Q9H9E1 313 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 WDR41Q9HAD4 459 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 NUDT4Q9NZJ9 180 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 NPAP1Q9NZP6 1156 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 CD274Q9NZQ7 290 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 PCDHA9Q9Y5H5 950 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 AP4B1Q9Y6B7 739 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 SHISA8B8ZZ34 492 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 H3BML4 177 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 H7C417 338 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 ADAMDEC1O15204 470 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 UGDHO60701 494 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 DEKP35659 375 aaKnown RBP8.05□□□□□ -1.12
PRKCH-208ENST00000553846 FNTAP49354 379 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 COMPP49747 757 aaPredicted RBP8.05□□□□□ -1.12
PRKCH-208ENST00000553846 NEK2P51955 445 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 NUDT6P53370 316 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 PNLIPRP2P54317 469 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 C21orf58P58505 322 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 POU4F1Q01851 419 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 EFR3AQ14156 821 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 P2RY6Q15077 328 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 FAM174BQ3ZCQ3 159 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 GLYR1Q49A26 553 aaPredicted RBP8.05□□□□□ -1.12
PRKCH-208ENST00000553846 SFRP5Q5T4F7 317 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 LIPJQ5W064 366 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 CLEC2AQ6UVW9 174 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 GALNT10Q86SR1 603 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 OR4K17Q8NGC6 315 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 OR4N2Q8NGD1 307 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 OR10D3Q8NH80 312 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 PROX1Q92786 737 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 GFM2Q969S9 779 aaKnown RBP8.05□□□□□ -1.12
PRKCH-208ENST00000553846 LRRC39Q96DD0 335 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 MSI2Q96DH6 328 aaKnown RBP8.05□□□□□ -1.12
PRKCH-208ENST00000553846 DTNBP1Q96EV8 351 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 TACO1Q9BSH4 297 aaKnown RBP8.05□□□□□ -1.12
PRKCH-208ENST00000553846 PRR14Q9BWN1 585 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 CACNG6Q9BXT2 260 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 BRINP2Q9C0B6 783 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 DDX47Q9H0S4 455 aaKnown RBP8.05□□□□□ -1.12
PRKCH-208ENST00000553846 EML4Q9HC35 981 aaKnown RBP8.05□□□□□ -1.12
PRKCH-208ENST00000553846 CISD1Q9NZ45 108 aaKnown RBP8.05□□□□□ -1.12
PRKCH-208ENST00000553846 MED11Q9P086 117 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 OPTCQ9UBM4 332 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 PRODH2Q9UF12 536 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 BCAP29Q9UHQ4 241 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 ADAM29Q9UKF5 820 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 PCDHGA11Q9Y5H2 935 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 NOTCH1P46531 2555 aa8.05□□□□□ -1.12
PRKCH-208ENST00000553846 CXorf49A8MYA2 514 aaPredicted RBP8.04□□□□□ -1.12
PRKCH-208ENST00000553846 E7ESA3 106 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 UBXN8O00124 270 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 UBFD1O14562 309 aaKnown RBP8.04□□□□□ -1.12
PRKCH-208ENST00000553846 KERAO60938 352 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 REM1O75628 298 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 EPB42P16452 691 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 ITGA2P17301 1181 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 CSNK2A2P19784 350 aaPredicted RBP8.04□□□□□ -1.12
PRKCH-208ENST00000553846 PTNP21246 168 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 FEN1P39748 380 aaKnown RBP8.04□□□□□ -1.12
PRKCH-208ENST00000553846 PSG6Q00889 435 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 GALNT1Q10472 559 aaPredicted RBP8.04□□□□□ -1.12
PRKCH-208ENST00000553846 FAM180BQ6P0A1 224 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 B3GLCTQ6Y288 498 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 LARP4Q71RC2 724 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRKCH-208ENST00000553846 ZNF619Q8N2I2 560 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 RFLNBQ8N5W9 214 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 SEMA6DQ8NFY4 1073 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 RNF128Q8TEB7 428 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 HSD17B8Q92506 261 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 HTRA1Q92743 480 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 EFHD2Q96C19 240 aaPredicted RBP8.04□□□□□ -1.12
PRKCH-208ENST00000553846 ERP27Q96DN0 273 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 KLHDC3Q9BQ90 382 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 HDHD5Q9BXW7 423 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 MRPL1Q9BYD6 325 aaKnown RBP8.04□□□□□ -1.12
PRKCH-208ENST00000553846 POTEKPQ9BYX7 375 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 STMN4Q9H169 189 aaPredicted RBP8.04□□□□□ -1.12
PRKCH-208ENST00000553846 ALG9Q9H6U8 611 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 GLRX2Q9NS18 164 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 PPP4R1LQ9P1A2 415 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 XPR1Q9UBH6 696 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 ABCG2Q9UNQ0 655 aa8.04□□□□□ -1.12
PRKCH-208ENST00000553846 RNF11Q9Y3C5 154 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms