RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 PRAMEF27A3QJZ7 478 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 ACOX3O15254 700 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 EFSO43281 561 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 HS6ST1O60243 411 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 STX11O75558 287 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 PDE9AO76083 593 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 PGM3O95394 542 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 ZNF682O95780 498 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 AK1P00568 194 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 SERPINA1P01009 418 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 OPN1SWP03999 348 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 ATP6V1B2P21281 511 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 PIGAP37287 484 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 EIF2S3P41091 472 aaKnown RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 MAP3K8P41279 467 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 RNF144AP50876 292 aaPredicted RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 POLE2P56282 527 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 CHRNEQ04844 493 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 TRAP1Q12931 704 aaKnown RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 KPNB1Q14974 876 aaKnown RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 CYP27C1Q4G0S4 372 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 FLYWCH1Q4VC44 716 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 EXOSC6Q5RKV6 272 aaKnown RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 B3GNTL1Q67FW5 361 aaPredicted RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 HEPHL1Q6MZM0 1159 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 CCDC81Q6ZN84 652 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 RPS19BP1Q86WX3 136 aaKnown RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 PROSER1Q86XN7 944 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 KRT73Q86Y46 540 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 SPACA3Q8IXA5 215 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 FAM13CQ8NE31 585 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 OR8K3Q8NH51 312 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 BBS10Q8TAM1 723 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 WDR60Q8WVS4 1066 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 ASB15Q8WXK1 588 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 HOXB13Q92826 284 aaPredicted RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 GATA6Q92908 595 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 TP53INP1Q96A56 240 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 HSPBAP1Q96EW2 488 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 RSRC1Q96IZ7 334 aaKnown RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 TPD52L3Q96J77 140 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 COL21A1Q96P44 957 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 TRNT1Q96Q11 434 aaKnown RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 ZNF607Q96SK3 696 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 ADOQ96SZ5 270 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 SDF2Q99470 211 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 G6PC3Q9BUM1 346 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 QRSL1Q9H0R6 528 aaKnown RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 RUBCNLQ9H714 662 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 TRIM45Q9H8W5 580 aaPredicted RBP9.02□□□□□ -0.97
CHD8-204ENST00000553622 FBXO34Q9NWN3 711 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 MYOTQ9UBF9 498 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 RAXQ9Y2V3 346 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 CEP295Q9C0D2 2601 aa9.02□□□□□ -0.97
CHD8-204ENST00000553622 A0A0G2JPF8 293 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 C1QTNF9BB2RNN3 333 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 HNRNPCL2B2RXH8 293 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 HNRNPCL3B7ZW38 293 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 M0QX08 132 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 MAN1A2O60476 641 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 FCMRO60667 390 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 ITGA10O75578 1167 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 SERPINB7O75635 380 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 IFNA14P01570 189 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 IGKV1D-16P01601 117 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 ALPPP05187 535 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 C1QTNF9P0C862 333 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 HNRNPCL4P0DMR1 293 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 HPGDP15428 266 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 ABCD3P28288 659 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 SSR4P51571 173 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 PSMD4P55036 377 aaKnown RBP9.01□□□□□ -0.97
CHD8-204ENST00000553622 VEZF1Q14119 521 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 MAPK11Q15759 364 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 CYBRD1Q53TN4 286 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 TYW3Q6IPR3 259 aaKnown RBP9.01□□□□□ -0.97
CHD8-204ENST00000553622 FRRS1Q6ZNA5 592 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 LRRC74BQ6ZQY2 392 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 ZAR1Q86SH2 424 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 PATL1Q86TB9 770 aaKnown RBP9.01□□□□□ -0.97
CHD8-204ENST00000553622 PTRH1Q86Y79 214 aaKnown RBP9.01□□□□□ -0.97
CHD8-204ENST00000553622 ARMC8Q8IUR7 673 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 PEX5LQ8IYB4 626 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 ZNF619Q8N2I2 560 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 TMEM156Q8N614 296 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 METTL25Q8N6Q8 603 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 ZNF441Q8N8Z8 693 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 TMEM102Q8N9M5 508 aaPredicted RBP9.01□□□□□ -0.97
CHD8-204ENST00000553622 SMYD1Q8NB12 490 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 CHDHQ8NE62 594 aaPredicted RBP9.01□□□□□ -0.97
CHD8-204ENST00000553622 C17orf47Q8NEP4 570 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 OR10Q1Q8NGQ4 319 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 SPPL2AQ8TCT8 520 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 LHPPQ9H008 270 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 ING2Q9H160 280 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 ZBTB20Q9HC78 741 aaPredicted RBP9.01□□□□□ -0.97
CHD8-204ENST00000553622 ADPRHL2Q9NX46 363 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 GPR83Q9NYM4 423 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 ACTR3BQ9P1U1 418 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 SEC14L3Q9UDX4 400 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms