RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TRNAU1APQ9NX07 287 aaKnown RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 YARS2Q9Y2Z4 477 aaKnown RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 GPC6Q9Y625 555 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 CDC14CA4D256 554 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 OR2A25A4D2G3 310 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 URADA6NGE7 173 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 CDK1P06493 297 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 DCNP07585 359 aaKnown RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 SAGP10523 405 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 JUNBP17275 347 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 IFNA8P32881 189 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 OR1D4P47884 311 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 ANXA11P50995 505 aaKnown RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 MFSD12Q6NUT3 480 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 CCDC80Q76M96 950 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 ZNF681Q96N22 645 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 DACH2Q96NX9 599 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 LRRC61Q9BV99 259 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 SPATA5L1Q9BVQ7 753 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 GABARAPL3Q9BY60 117 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 DPH1Q9BZG8 443 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 POLR2J2Q9GZM3 115 aaKnown RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 C8orf33Q9H7E9 229 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 DAPK2Q9UIK4 370 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 CAB39Q9Y376 341 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 CHST10O43529 356 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 AZGP1P25311 298 aaKnown RBP11.88□□□□□ -0.51
SCAF11-209ENST00000547018 RABIFP47224 123 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 SLC9A3P48764 834 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 DAB2P98082 770 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 PUS10Q3MIT2 529 aaKnown RBP11.88□□□□□ -0.51
SCAF11-209ENST00000547018 KIAA0895LQ68EN5 471 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 PEX5LQ8IYB4 626 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 TEX47Q8TBZ9 253 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 NT5DC2Q9H857 520 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 TMEM165Q9HC07 324 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 ANKHQ9HCJ1 492 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 SCML1Q9UN30 329 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 OR10H1Q9Y4A9 318 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 SPTY2D1-AS1A0A0U1RR47 76 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 GTF2E2P29084 291 aaKnown RBP11.88□□□□□ -0.51
SCAF11-209ENST00000547018 TUBA3CQ13748 450 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 DGUOKQ16854 277 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 IGFN1Q86VF2 1251 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 CYB561A3Q8NBI2 242 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 OR51L1Q8NGJ5 315 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 GATAD2BQ8WXI9 593 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 ERGIC3Q9Y282 383 aa11.88□□□□□ -0.51
SCAF11-209ENST00000547018 FAAHO00519 579 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 LGI1O95970 557 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 GIPRP48546 466 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 ARL4DP49703 201 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 INAVAQ3KP66 663 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 ANKRD13BQ86YJ7 626 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 SIX5Q8N196 739 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 ZNF655Q8N720 491 aaPredicted RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 OR52R1Q8NGF1 315 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 OR9Q1Q8NGQ5 310 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 KLHL6Q8WZ60 621 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 OR51V1Q9H2C8 321 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 SNTG1Q9NSN8 517 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 UCKL1Q9NWZ5 548 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 TAS2R7Q9NYW3 318 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 DHCR7Q9UBM7 475 aaKnown RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 LRRN3E7EW58 273 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 MYL12BO14950 172 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 TBX1O43435 398 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 GYPBP06028 91 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 ACP2P11117 423 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 RPS6KA3P51812 740 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 C1orf189Q5VU69 101 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 MCATQ8IVS2 390 aaKnown RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 KIAA1958Q8N8K9 716 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 BBS10Q8TAM1 723 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 IPCEF1Q8WWN9 437 aaPredicted RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 HTRA1Q92743 480 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 AHCYL2Q96HN2 611 aaKnown RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 SERINC2Q96SA4 455 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 PITX2Q99697 317 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 LRRN3Q9H3W5 708 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 FSCN3Q9NQT6 498 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 TMEM9Q9P0T7 183 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 FTSJ1Q9UET6 329 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 MGAT4BQ9UQ53 548 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 IFT52Q9Y366 437 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 MPDZO75970 2070 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 SOX30O94993 753 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 ADAP00813 363 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 MRPL3P09001 348 aaKnown RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 OCM2P0CE71 109 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 OCMP0CE72 109 aaPredicted RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 HOXB6P17509 224 aaKnown RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 ZNF10P21506 573 aaPredicted RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 ZNF91Q05481 1191 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 LARS2Q15031 903 aaKnown RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 TRIM16LQ309B1 348 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 MRPL2Q5T653 305 aaKnown RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 PRR22Q8IZ63 422 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 DTX3Q8N9I9 347 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 OR4F15Q8NGB8 312 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms