RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 TRPC1P48995 793 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 CDSNQ15517 529 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 DECR1Q16698 335 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 NHSL2Q5HYW2 709 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 ATG16L1Q676U5 607 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 RTL6Q6ICC9 239 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 TMEM211Q6ICI0 200 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 OGFOD2Q6N063 350 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 MFSD12Q6NUT3 480 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 ZCCHC12Q6PEW1 402 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 TRIM42Q8IWZ5 723 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 RPRMLQ8N4K4 120 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 CDRT4Q8N9R6 151 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 SH3GL2Q99962 352 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 EQTNQ9NQ60 294 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 ACAD8Q9UKU7 415 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 MAPRE3Q9UPY8 281 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 FAM215AQ9Y5M1 114 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 WIF1Q9Y5W5 379 aa14.09□□□□□ -0.15
ECHDC2-223ENST00000542552 GXYLT2A0PJZ3 443 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 SDHDO14521 159 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 HDAC3O15379 428 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 WDR1O75083 606 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 TRAPPC6AO75865 159 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 IGKV1D-16P01601 117 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 ACP2P11117 423 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 LBPP18428 481 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 EVI2BP34910 448 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 PRKAG1P54619 331 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 PRR5P85299 388 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 CRYZQ08257 329 aaKnown RBP14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 VPS26BQ4G0F5 336 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 WLSQ5T9L3 541 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 VASNQ6EMK4 673 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 PLCZ1Q86YW0 608 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 SLC16A11Q8NCK7 471 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 FAM110BQ8TC76 370 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 PIK3R3Q92569 461 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 C16orf58Q96GQ5 468 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 ATP6V1G3Q96LB4 118 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 DUSP26Q9BV47 211 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 OR2B2Q9GZK3 357 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 EXO5Q9H790 373 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 CXorf36Q9H7Y0 433 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 MANSC1Q9H8J5 431 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 SERHLQ9NQF3 203 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 FLRT3Q9NZU0 649 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 MRTO4Q9UKD2 239 aaKnown RBP14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 ABCG2Q9UNQ0 655 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 CACNA1CQ13936 2221 aa14.08□□□□□ -0.16
ECHDC2-223ENST00000542552 FIGNL2A6NMB9 653 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 SCN2BO60939 215 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 HOXD4P09016 255 aaPredicted RBP14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 DCTP40126 519 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 PSMD4P55036 377 aaKnown RBP14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 WNT3P56703 355 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 DUSP5Q16690 384 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 ZNF630Q2M218 657 aaPredicted RBP14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 LSM12Q3MHD2 195 aaKnown RBP14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 EIPR1Q53HC9 387 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 TTMPQ5BVD1 217 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 ZNF585AQ6P3V2 769 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 ACAD11Q709F0 780 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 HDXQ7Z353 690 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 WDR75Q8IWA0 830 aaKnown RBP14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 FAM83FQ8NEG4 500 aaPredicted RBP14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 OR8J2Q8NGG1 315 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 GPR151Q8TDV0 419 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 ZNF75CPQ92670 426 aaPredicted RBP14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 TIMP4Q99727 224 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 TTYH2Q9BSA4 534 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 RTN4RQ9BZR6 473 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 VIPAS39Q9H9C1 493 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 ZCCHC3Q9NUD5 404 aaKnown RBP14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 FAM120CQ9NX05 1096 aaKnown RBP14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 GIN1Q9NXP7 522 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 MRPS18CQ9Y3D5 142 aaKnown RBP14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 LRBAP50851 2863 aa14.07□□□□□ -0.16
ECHDC2-223ENST00000542552 TACC2O95359 2948 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 ARHGAP21Q5T5U3 1957 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 C15orf38-AP3S2A0A0A6YYH1 394 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 C17orf51A8MQB3 221 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 PRSS44E7EML9 344 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 SLCO1B7G3V0H7 640 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 KCNH1O95259 989 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 CLDN14O95500 239 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 C6orf47O95873 294 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 HMGN2P05204 90 aaKnown RBP14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 ALDOCP09972 364 aaKnown RBP14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 GLI4P10075 376 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 GABRA1P14867 456 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 GRNP28799 593 aaKnown RBP14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 CCT3P49368 545 aaKnown RBP14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 NUP107P57740 925 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 HBA1P69905 142 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 PMPCAQ10713 525 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 PGS1Q32NB8 556 aa14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 WIPI1Q5MNZ9 446 aaPredicted RBP14.06□□□□□ -0.16
ECHDC2-223ENST00000542552 ZNF787Q6DD87 383 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms