RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ACTRT2Q8TDY3 377 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 CKAP2Q8WWK9 683 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 SLC9A6Q92581 669 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 TESCQ96BS2 214 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 TMCO6Q96DC7 493 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 C7orf26Q96N11 449 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 DMRTA2Q96SC8 542 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 PRPF18Q99633 342 aaKnown RBP8.88□□□□□ -0.99
YBX3-212ENST00000542002 DPY30Q9C005 99 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 SERHL2Q9H4I8 314 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 METTL7AQ9H8H3 244 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 C3orf14Q9HBI5 128 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 PNPLA3Q9NST1 481 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 AIG1Q9NVV5 245 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 FBXL2Q9UKC9 423 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 BOKQ9UMX3 212 aaPredicted RBP8.88□□□□□ -0.99
YBX3-212ENST00000542002 C15orf41Q9Y2V0 281 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 MEMO1Q9Y316 297 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 USH1CQ9Y6N9 552 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 EML6Q6ZMW3 1958 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 TRGV5A0A0B4J1U4 118 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 PRSS51A0A1B0GVH4 220 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 TRPC5OSA6NMA1 111 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 KDM4EB2RXH2 506 aaPredicted RBP8.87□□□□□ -0.99
YBX3-212ENST00000542002 SLCO1B7G3V0H7 640 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 RNASET2O00584 256 aaKnown RBP8.87□□□□□ -0.99
YBX3-212ENST00000542002 AQP7O14520 342 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 ZIC3O60481 467 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 TRAPPC6AO75865 159 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 KCNK2O95069 426 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 UTS2O95399 124 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 HPNP05981 417 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 TPOP07202 933 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 GDF1P27539 372 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 IL12BP29460 328 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 EVI2BP34910 448 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 RFX3P48380 749 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 IDH3AP50213 366 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 CASP9P55211 416 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 RPS26P62854 115 aaKnown RBP8.87□□□□□ -0.99
YBX3-212ENST00000542002 EFR3AQ14156 821 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 LASP1Q14847 261 aaKnown RBP8.87□□□□□ -0.99
YBX3-212ENST00000542002 DECR1Q16698 335 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 WIPI1Q5MNZ9 446 aaPredicted RBP8.87□□□□□ -0.99
YBX3-212ENST00000542002 CCNJQ5T5M9 372 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 NXNQ6DKJ4 435 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 RTL6Q6ICC9 239 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 FIGNL1Q6PIW4 674 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 SZRD1Q7Z422 152 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 YRDCQ86U90 279 aaKnown RBP8.87□□□□□ -0.99
YBX3-212ENST00000542002 MARCH3Q86UD3 253 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 CD163Q86VB7 1156 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 KIRREL3Q8IZU9 778 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 NATD1Q8N6N6 113 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 CDRT4Q8N9R6 151 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 OR1J4Q8NGS1 313 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 NEIL3Q8TAT5 605 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 ITLN2Q8WWU7 325 aaPredicted RBP8.87□□□□□ -0.99
YBX3-212ENST00000542002 RMND5BQ96G75 393 aaPredicted RBP8.87□□□□□ -0.99
YBX3-212ENST00000542002 ZNF597Q96LX8 424 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 MS4A4EQ96PG1 132 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 KLHDC3Q9BQ90 382 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 EBF4Q9BQW3 602 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 OSBPL11Q9BXB4 747 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 LDAHQ9H6V9 325 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 Q9N2J8 555 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 SERHLQ9NQF3 203 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 ZCCHC3Q9NUD5 404 aaKnown RBP8.87□□□□□ -0.99
YBX3-212ENST00000542002 INTS9Q9NV88 658 aaKnown RBP8.87□□□□□ -0.99
YBX3-212ENST00000542002 ATAD3AQ9NVI7 634 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 KLRF1Q9NZS2 232 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 MAPRE3Q9UPY8 281 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 SLC6A5Q9Y345 797 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 CROCCQ5TZA2 2017 aa8.87□□□□□ -0.99
YBX3-212ENST00000542002 SVILO95425 2214 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 RP1L1Q8IWN7 2480 aaPredicted RBP8.86□□□□□ -0.99
YBX3-212ENST00000542002 E9PLN8 166 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 PRRG2O14669 202 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 CFLARO15519 480 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 HCN1O60741 890 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 DIAPH2O60879 1101 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 CPSF4O95639 269 aaKnown RBP8.86□□□□□ -0.99
YBX3-212ENST00000542002 CDKN2CP42773 168 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 KIR3DL1P43629 444 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 MASP1P48740 699 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 PSPHP78330 225 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 RPP38P78345 283 aaKnown RBP8.86□□□□□ -0.99
YBX3-212ENST00000542002 TP53BP2Q13625 1128 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 ZNHIT3Q15649 155 aaPredicted RBP8.86□□□□□ -0.99
YBX3-212ENST00000542002 GRAMD1BQ3KR37 738 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 FAM174BQ3ZCQ3 159 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 DCST1Q5T197 706 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 ZCCHC12Q6PEW1 402 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 PAOXQ6QHF9 649 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 OLIG3Q7RTU3 272 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 C6orf120Q7Z4R8 191 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 PLCZ1Q86YW0 608 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 GOLGA6L1Q8N7Z2 621 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 FAM83FQ8NEG4 500 aaPredicted RBP8.86□□□□□ -0.99
YBX3-212ENST00000542002 OR5D16Q8NGK9 328 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms