RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SDCCAG3Q96C92 435 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 ZBED6CLQ96FA7 236 aaPredicted RBP13.03□□□□□ -0.32
LTBR-209ENST00000541102 SIKE1Q9BRV8 207 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 SLC6A13Q9NSD5 602 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 RYDENQ9NUL5 291 aaKnown RBP13.03□□□□□ -0.32
LTBR-209ENST00000541102 ALKBH4Q9NXW9 302 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 ZIM2Q9NZV7 527 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 C19orf53Q9UNZ5 99 aaPredicted RBP13.03□□□□□ -0.32
LTBR-209ENST00000541102 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 TRGV5A0A0B4J1U4 118 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 ANKRD33BA6NCL7 494 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 BCKDKO14874 412 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 HNRNPRO43390 633 aaKnown RBP13.02□□□□□ -0.33
LTBR-209ENST00000541102 TRIM3O75382 744 aaPredicted RBP13.02□□□□□ -0.33
LTBR-209ENST00000541102 PPM1BO75688 479 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 TRAPPC6AO75865 159 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 BCAS2O75934 225 aaPredicted RBP13.02□□□□□ -0.33
LTBR-209ENST00000541102 PGRP06401 933 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 AGAP20933 346 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 GDF1P27539 372 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 CASP3P42574 277 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 CDKN2CP42773 168 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 PPICP45877 212 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 POLR2JP52435 117 aaKnown RBP13.02□□□□□ -0.33
LTBR-209ENST00000541102 CLNS1AP54105 237 aaKnown RBP13.02□□□□□ -0.33
LTBR-209ENST00000541102 CORO7P57737 925 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 PLCXD2Q0VAA5 305 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 AGKQ53H12 422 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 TBCELQ5QJ74 424 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 NPSR1Q6W5P4 371 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 PACS2Q86VP3 889 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 RPRMLQ8N4K4 120 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 MARVELD2Q8N4S9 558 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 OR5AK3PQ8NH89 298 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 OR5P2Q8WZ92 322 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 OMA1Q96E52 524 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 FAM120BQ96EK7 910 aaKnown RBP13.02□□□□□ -0.33
LTBR-209ENST00000541102 HSPBAP1Q96EW2 488 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 GIMAP5Q96F15 307 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 OTUB1Q96FW1 271 aaPredicted RBP13.02□□□□□ -0.33
LTBR-209ENST00000541102 ZNF597Q96LX8 424 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 OR52E6Q96RD3 313 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 PRPF18Q99633 342 aaKnown RBP13.02□□□□□ -0.33
LTBR-209ENST00000541102 ANGPTL4Q9BY76 406 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 SLC6A15Q9H2J7 730 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 ZNF703Q9H7S9 590 aaPredicted RBP13.02□□□□□ -0.33
LTBR-209ENST00000541102 SERHLQ9NQF3 203 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 COQ3Q9NZJ6 369 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 B4GALT7Q9UBV7 327 aa13.02□□□□□ -0.33
LTBR-209ENST00000541102 NCOA6Q14686 2063 aaPredicted RBP13.01□□□□□ -0.33
LTBR-209ENST00000541102 A0A087WV62 115 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 A0A1B0GVC2 190 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 FAM234BA2RU67 622 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 C2orf72A6NCS6 295 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 OR14I1A6ND48 311 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 RNASET2O00584 256 aaKnown RBP13.01□□□□□ -0.33
LTBR-209ENST00000541102 AQP7O14520 342 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 GNB5O14775 395 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 ACOX3O15254 700 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 CFLARO15519 480 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 SUSD5O60279 629 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 HCN1O60741 890 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 REM1O75628 298 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 SNX4O95219 450 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 CPSF4O95639 269 aaKnown RBP13.01□□□□□ -0.33
LTBR-209ENST00000541102 NAGAP17050 411 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 CAPN3P20807 821 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 DRD5P21918 477 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 GPC1P35052 558 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 ATP4BP51164 291 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 DCAF7P61962 342 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 PMPCAQ10713 525 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 GAB1Q13480 694 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 SQLEQ14534 574 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 MLC1Q15049 377 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 TOMM20Q15388 145 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 TIGD2Q4W5G0 525 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 BLOC1S3Q6QNY0 202 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 NUP54Q7Z3B4 507 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 SPATA21Q7Z572 469 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 ZFP28Q8NHY6 868 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 PSMA8Q8TAA3 256 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 FBXO30Q8TB52 745 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 CA5BP1Q8WTZ4 195 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 TMBIM1Q969X1 311 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 SARAFQ96BY9 339 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 C16orf58Q96GQ5 468 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 VSTM2LQ96N03 204 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 SECISBP2Q96T21 854 aaKnown RBP13.01□□□□□ -0.33
LTBR-209ENST00000541102 METTL7AQ9H8H3 244 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 FOLH1BQ9HBA9 442 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 CHST11Q9NPF2 352 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 EQTNQ9NQ60 294 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 SAR1AQ9NR31 198 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 DDX18Q9NVP1 670 aaKnown RBP13.01□□□□□ -0.33
LTBR-209ENST00000541102 CCDC167Q9P0B6 97 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 NTMQ9P121 344 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 SPRR3Q9UBC9 169 aa13.01□□□□□ -0.33
LTBR-209ENST00000541102 ADAM21Q9UKJ8 722 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms