RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 CCDC116Q8IYX3 515 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 ACOT4Q8N9L9 421 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 SRFBP1Q8NEF9 429 aaKnown RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 OR2L5Q8NG80 312 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 CNRIP1Q96F85 164 aaPredicted RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 SLC38A2Q96QD8 506 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 ARHGDIGQ99819 225 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 PRRG3Q9BZD7 231 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 SAP130Q9H0E3 1048 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 MBNL1Q9NR56 388 aaKnown RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 PHPT1Q9NRX4 125 aaPredicted RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 CALML5Q9NZT1 146 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 CES1P1Q9UKY3 287 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 ENTPD4Q9Y227 616 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 LIPT1Q9Y234 373 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 EXOSC1Q9Y3B2 195 aaKnown RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 ATG4BQ9Y4P1 393 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 GVINP1Q7Z2Y8 2422 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 PRR23AA6NEV1 266 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 GLOD5A6NK44 160 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 PROB1E7EW31 1015 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 PLD2O14939 933 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 PRICKLE3O43900 615 aaPredicted RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 GFRA3O60609 400 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 ACP5P13686 325 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 CSNK2A2P19784 350 aaPredicted RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 ATP5A1P25705 553 aaKnown RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 TAS2R41P59536 307 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 SCN1BQ07699 218 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 CEBPEQ15744 281 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 GLYR1Q49A26 553 aaPredicted RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 ZNF311Q5JNZ3 666 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 ARMC4Q5T2S8 1044 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 FAAH2Q6GMR7 532 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 SLC48A1Q6P1K1 146 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 ZC3H14Q6PJT7 736 aaKnown RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 XKRXQ6PP77 449 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 RASSF6Q6ZTQ3 369 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 OLIG3Q7RTU3 272 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 ZBTB44Q8NCP5 570 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 OR8K5Q8NH50 307 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 RNFT2Q96EX2 444 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 ZNF486Q96H40 463 aaPredicted RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 KCTD7Q96MP8 289 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 YIPF4Q9BSR8 244 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 PLA2G12AQ9BZM1 189 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 TPK1Q9H3S4 243 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 OSGEPL1Q9H4B0 414 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 XKR8Q9H6D3 395 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 IMP3Q9NV31 184 aaKnown RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 PLEKHB1Q9UF11 243 aaPredicted RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 OR1A2Q9Y585 309 aa13.62□□□□□ -0.23
CDCA3-207ENST00000538862 SPIN1Q9Y657 262 aaPredicted RBP13.62□□□□□ -0.23
CDCA3-207ENST00000538862 KDM4EB2RXH2 506 aaPredicted RBP13.61□□□□□ -0.23
CDCA3-207ENST00000538862 SLC30A4O14863 429 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 SSX4O60224 188 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 PRKRAO75569 313 aaKnown RBP13.61□□□□□ -0.23
CDCA3-207ENST00000538862 ALPPP05187 535 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 KRT8P05787 483 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 MSL3P1P0C860 447 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 IL7P13232 177 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 IFNA8P32881 189 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 MPIP34949 423 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 MTNR1AP48039 350 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 LSM11P83369 360 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDCA3-207ENST00000538862 ST3GAL3Q11203 375 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 IRF4Q15306 451 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 BAK1Q16611 211 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 TMEM44Q2T9K0 475 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 FLYWCH1Q4VC44 716 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 RSBN1Q5VWQ0 802 aaPredicted RBP13.61□□□□□ -0.23
CDCA3-207ENST00000538862 C22orf42Q6IC83 251 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 RAB43Q86YS6 212 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 OR7D2Q96RA2 312 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 NEK6Q9HC98 313 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 GIMAP4Q9NUV9 329 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 SLC13A4Q9UKG4 626 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 GSTK1Q9Y2Q3 226 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 SF3B6Q9Y3B4 125 aaKnown RBP13.61□□□□□ -0.23
CDCA3-207ENST00000538862 ZNF292O60281 2723 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 SPAG17Q6Q759 2223 aa13.61□□□□□ -0.23
CDCA3-207ENST00000538862 PRR19A6NJB7 356 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 C4orf51C9J302 202 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 MID1O15344 667 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 SEC14L5O43304 696 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 UBXN7O94888 489 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 KLF8O95600 359 aaPredicted RBP13.6□□□□□ -0.23
CDCA3-207ENST00000538862 AIFM1O95831 613 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 FGF9P31371 208 aaPredicted RBP13.6□□□□□ -0.23
CDCA3-207ENST00000538862 KIR2DL1P43626 348 aaPredicted RBP13.6□□□□□ -0.23
CDCA3-207ENST00000538862 RFX2P48378 723 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 TGM3Q08188 693 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 KRT33BQ14525 404 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 LPAL2Q16609 132 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 NDUFA5Q16718 116 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 ZMAT1Q5H9K5 638 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 GDPD1Q8N9F7 314 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 NUP43Q8NFH3 380 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 OR6F1Q8NGZ6 308 aa13.6□□□□□ -0.23
CDCA3-207ENST00000538862 AP3S1Q92572 193 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms