RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CYBAP13498 195 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 RNF144AP50876 292 aaPredicted RBP17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 MANFP55145 182 aaKnown RBP17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 RTP2Q5QGT7 225 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 HIST2H2AA3Q6FI13 130 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 SFXN4Q6P4A7 337 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 SLC24A5Q71RS6 500 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 OR56B4Q8NH76 319 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 POF1BQ8WVV4 589 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 VOPP1Q96AW1 172 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 C12orf66Q96MD2 445 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 C7orf50Q9BRJ6 194 aaKnown RBP17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 C1QTNF6Q9BXI9 259 aa17.46■□□□□ 0.39
SFSWAP-207ENST00000538548 FZD7O75084 574 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 HRGP04196 525 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 ACP5P13686 325 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 CCR6P51684 374 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 TBPL1P62380 186 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 FZD5Q13467 585 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 OPCMLQ14982 345 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 KIAA1161Q6NSJ0 714 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 CFAP77Q6ZQR2 320 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 KANSL1Q7Z3B3 1105 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 CAPNS2Q96L46 248 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 JAM3Q9BX67 310 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 METTL17Q9H7H0 456 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 ZNF593O00488 134 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 ASGR1P07306 291 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 C1GALT1C1LP0DN25 315 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 PREPP48147 710 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 FAM83HQ6ZRV2 1179 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 NLRC3Q7RTR2 1065 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 METTL3Q86U44 580 aaKnown RBP17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 CMIPQ8IY22 773 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 OR6T1Q8NGN1 323 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 CD99L2Q8TCZ2 262 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 PTP4A1Q93096 173 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 SPRTNQ9H040 489 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 SUV39H2Q9H5I1 410 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 LDAHQ9H6V9 325 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 ZNF275Q9NSD4 429 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 ACSL5Q9ULC5 683 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 SH2B3Q9UQQ2 575 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 DYRK1BQ9Y463 629 aa17.45■□□□□ 0.38
SFSWAP-207ENST00000538548 CD3GP09693 182 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 NPPBP16860 134 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 KELP23276 732 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 ATP6V1E1P36543 226 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 TPMTP51580 245 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 CLEC12AQ5QGZ9 265 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 ASPGQ86U10 573 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 MEX3DQ86XN8 651 aaKnown RBP17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 TRMT10AQ8TBZ6 339 aaKnown RBP17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 GNPDA2Q8TDQ7 276 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 H3BUI4 141 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 B4GALT2O60909 372 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 LATS1O95835 1130 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 IFNGR2P38484 337 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 MAPK9P45984 424 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 SELENOPP49908 381 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 MMP15P51511 669 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 TSPAN5P62079 268 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 MAP4K2Q12851 820 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 TSPAN31Q12999 210 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 KCNA10Q16322 511 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 SYPL1Q16563 259 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 SEZ6L2Q6UXD5 910 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 C3P1Q6ZMU1 363 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 RASSF6Q6ZTQ3 369 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 ZNF480Q8WV37 535 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 DPYSL5Q9BPU6 564 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 P2RX2Q9UBL9 471 aa17.44■□□□□ 0.38
SFSWAP-207ENST00000538548 H7C4K7 107 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 UBL3O95164 117 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 WDPCPO95876 746 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 HMGA1P17096 107 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 F8A1P23610 371 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 SHC1P29353 583 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 HTR1FP30939 366 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 BLVRAP53004 296 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 SMAD3P84022 425 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 SLC22A10Q63ZE4 541 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 PPP1R16AQ96I34 528 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 FOPNLQ96NB1 174 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 SFXN2Q96NB2 322 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 SLC7A5P2Q9GIP4 190 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 CD93Q9NPY3 652 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 B4GALT6Q9UBX8 382 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 KIF26AQ9ULI4 1882 aaPredicted RBP17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 RANBP2P49792 3224 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 A0A087WUU8 490 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 TSPAN6O43657 245 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 SNRPD1P62314 119 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 TSTA3Q13630 321 aaPredicted RBP17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 TPRA1Q86W33 373 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 SMPDL3AQ92484 453 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 FAM83CQ9BQN1 747 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 SORBS1Q9BX66 1292 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 TEX12Q9BXU0 123 aa17.43■□□□□ 0.38
SFSWAP-207ENST00000538548 PRAMEF27A3QJZ7 478 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms