RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 EXOSC6Q5RKV6 272 aaKnown RBP12□□□□□ -0.49
PRKDC-206ENST00000536429 DCST1Q5T197 706 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 MFSD12Q6NUT3 480 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 MTFR2Q6P444 385 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 ZAR1Q86SH2 424 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 WDR75Q8IWA0 830 aaKnown RBP12□□□□□ -0.49
PRKDC-206ENST00000536429 SLC16A11Q8NCK7 471 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 OR1J4Q8NGS1 313 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 PHF10Q8WUB8 498 aaKnown RBP12□□□□□ -0.49
PRKDC-206ENST00000536429 OR5P2Q8WZ92 322 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 SLC9A6Q92581 669 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 RMND5BQ96G75 393 aaPredicted RBP12□□□□□ -0.49
PRKDC-206ENST00000536429 TP63Q9H3D4 680 aaPredicted RBP12□□□□□ -0.49
PRKDC-206ENST00000536429 WDR55Q9H6Y2 383 aaPredicted RBP12□□□□□ -0.49
PRKDC-206ENST00000536429 MANSC1Q9H8J5 431 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 Q9N2J8 555 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 FBXO34Q9NWN3 711 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 ACAD8Q9UKU7 415 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 WIF1Q9Y5W5 379 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 SNX8Q9Y5X2 465 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 MED12Q93074 2177 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 CSMD1Q96PZ7 3565 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 C15orf38-AP3S2A0A0A6YYH1 394 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 GOLGA8QA0A0J9YX86 632 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 GOLGA8OA6NCC3 632 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 C9JVG2 144 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 PRSS44E7EML9 344 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 GOLGA8NF8WBI6 632 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 FADS1O60427 444 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 NKX2-2O95096 273 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 IL33O95760 270 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 LBPP18428 481 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 TCEA1P23193 301 aaKnown RBP11.99□□□□□ -0.49
PRKDC-206ENST00000536429 ELAVL4P26378 380 aaKnown RBP11.99□□□□□ -0.49
PRKDC-206ENST00000536429 ACVR2AP27037 513 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 EPHA3P29320 983 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 EVI2BP34910 448 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 RPL3P39023 403 aaKnown RBP11.99□□□□□ -0.49
PRKDC-206ENST00000536429 NME5P56597 212 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 NUP107P57740 925 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 PHC1P78364 1004 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 MRPS22P82650 360 aaKnown RBP11.99□□□□□ -0.49
PRKDC-206ENST00000536429 MAD2L1Q13257 205 aaPredicted RBP11.99□□□□□ -0.49
PRKDC-206ENST00000536429 LASP1Q14847 261 aaKnown RBP11.99□□□□□ -0.49
PRKDC-206ENST00000536429 TOMM20Q15388 145 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 ZNHIT3Q15649 155 aaPredicted RBP11.99□□□□□ -0.49
PRKDC-206ENST00000536429 DECR1Q16698 335 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 SMU1Q2TAY7 513 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 OR4F3Q6IEY1 312 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 APOOLQ6UXV4 268 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 CAMKMTQ7Z624 323 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 CLECL1Q8IZS7 167 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 CLEC4FQ8N1N0 589 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 FAM83FQ8NEG4 500 aaPredicted RBP11.99□□□□□ -0.49
PRKDC-206ENST00000536429 PSMA8Q8TAA3 256 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 GPR151Q8TDV0 419 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 ZNF75CPQ92670 426 aaPredicted RBP11.99□□□□□ -0.49
PRKDC-206ENST00000536429 ATP6V1G3Q96LB4 118 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 TEX37Q96LM6 180 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 MS4A4EQ96PG1 132 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 SH3GL2Q99962 352 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 DUSP26Q9BV47 211 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 BHLHE41Q9C0J9 482 aaPredicted RBP11.99□□□□□ -0.49
PRKDC-206ENST00000536429 ZCCHC3Q9NUD5 404 aaKnown RBP11.99□□□□□ -0.49
PRKDC-206ENST00000536429 ALKBH4Q9NXW9 302 aa11.99□□□□□ -0.49
PRKDC-206ENST00000536429 NCOA6Q14686 2063 aaPredicted RBP11.98□□□□□ -0.49
PRKDC-206ENST00000536429 C19orf84I3L1E1 186 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 HDAC3O15379 428 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 SASH3O75995 380 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 UTS2O95399 124 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 HMGN2P05204 90 aaKnown RBP11.98□□□□□ -0.49
PRKDC-206ENST00000536429 SMSP52788 366 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 HBA1P69905 142 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 PSPHP78330 225 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 CRYZQ08257 329 aaKnown RBP11.98□□□□□ -0.49
PRKDC-206ENST00000536429 PMPCAQ10713 525 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 STX5Q13190 355 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 ART3Q13508 389 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 GRAMD1BQ3KR37 738 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 SLC9B1Q4ZJI4 515 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 CCNJQ5T5M9 372 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 ATG16L1Q676U5 607 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 FIGNL1Q6PIW4 674 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 MARCH3Q86UD3 253 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 ANKRD46Q86W74 232 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 PLCZ1Q86YW0 608 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 CCDC71Q8IV32 467 aaPredicted RBP11.98□□□□□ -0.49
PRKDC-206ENST00000536429 ULK2Q8IYT8 1036 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 PIAS4Q8N2W9 510 aaPredicted RBP11.98□□□□□ -0.49
PRKDC-206ENST00000536429 CDRT4Q8N9R6 151 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 OR5AK3PQ8NH89 298 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 CEP70Q8NHQ1 597 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 RAB3IL1Q8TBN0 382 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 SARAFQ96BY9 339 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 SDCCAG3Q96C92 435 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 TIMP4Q99727 224 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 UGT2B28Q9BY64 529 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 C3orf14Q9HBI5 128 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 ATAD3AQ9NVI7 634 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 GPATCH2Q9NW75 528 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms