RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ZRANB3Q5FWF4 1079 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 NHSL2Q5HYW2 709 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 C10orf120Q5SQS8 335 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 GFI1BQ5VTD9 330 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 SHQ1Q6PI26 577 aaKnown RBP2.88□□□□□ -1.95
SNHG1-202ENST00000535689 STXBP4Q6ZWJ1 553 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 MARK2Q7KZI7 788 aaKnown RBP2.88□□□□□ -1.95
SNHG1-202ENST00000535689 BHLHA9Q7RTU4 235 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 ZER1Q7Z7L7 766 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 HOGA1Q86XE5 327 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 MEX3DQ86XN8 651 aaKnown RBP2.88□□□□□ -1.95
SNHG1-202ENST00000535689 SLC25A45Q8N413 288 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 TMEM99Q8N816 258 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 SLC37A3Q8NCC5 494 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 TRIM58Q8NG06 486 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 SYAP1Q96A49 352 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-202ENST00000535689 SMARCD1Q96GM5 515 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 ATXN7L3BQ96GX2 97 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 PCED1BQ96HM7 432 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 HPDLQ96IR7 371 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 PIWIL1Q96J94 861 aaKnown RBP2.88□□□□□ -1.95
SNHG1-202ENST00000535689 TCEANC2Q96MN5 208 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 GDAP1L1Q96MZ0 367 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 JAKMIP1Q96N16 626 aaKnown RBP2.88□□□□□ -1.95
SNHG1-202ENST00000535689 PSMB7Q99436 277 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 PKMYT1Q99640 499 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 RSPH9Q9H1X1 276 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-202ENST00000535689 NEUROG2Q9H2A3 272 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 TMEM245Q9H330 911 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 RIMS4Q9H426 269 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-202ENST00000535689 PARVGQ9HBI0 331 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 DNAJC4Q9NNZ3 241 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 DMAP1Q9NPF5 467 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-202ENST00000535689 PRSS16Q9NQE7 514 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 ATAD3AQ9NVI7 634 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 SLCO1C1Q9NYB5 712 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 SPASTQ9UBP0 616 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 STYXL1Q9Y6J8 313 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 DIDO1Q9BTC0 2240 aaKnown RBP2.88□□□□□ -1.95
SNHG1-202ENST00000535689 ZFHX3Q15911 3703 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 APCP25054 2843 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 A0A0B4J203 849 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ANTXRLA6NF34 631 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF233A6NK53 670 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 TMEM110-MUSTN1A8MSY1 372 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 E9PMD0 336 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 AQP9O43315 295 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 FCGR3BO75015 233 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 LRCH4O75427 683 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 CLN5O75503 358 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 KHDRBS3O75525 346 aaKnown RBP2.87□□□□□ -1.95
SNHG1-202ENST00000535689 MTRF1O75570 445 aaKnown RBP2.87□□□□□ -1.95
SNHG1-202ENST00000535689 IL1BP01584 269 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ALPIP09923 528 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 VDRP11473 427 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 CYP2A7P20853 494 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 HNRNPA2B1P22626 353 aaKnown RBP2.87□□□□□ -1.95
SNHG1-202ENST00000535689 LMO2P25791 158 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 PIK3R1P27986 724 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 PRPHP41219 470 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 RABIFP47224 123 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 AP3M2P53677 418 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 PAX9P55771 341 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 UBASH3AP57075 661 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ERVK11-1P61568 191 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ERVK-16P61578 105 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 NUCB2P80303 420 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ARF5P84085 180 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 SLC34A1Q06495 639 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 EFTUD2Q15029 972 aaKnown RBP eCLIP2.87□□□□□ -1.952e-44■■■■■ 48.4
SNHG1-202ENST00000535689 HERC3Q15034 1050 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 P2RY6Q15077 328 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 TAB1Q15750 504 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF74Q16587 644 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 MEP1BQ16820 701 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 SMU1Q2TAY7 513 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 HNRNPA1L2Q32P51 320 aaKnown RBP2.87□□□□□ -1.95
SNHG1-202ENST00000535689 PHLDA2Q53GA4 152 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ARMCX4Q5H9R4 360 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 FFAR4Q5NUL3 377 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ARHGAP11AQ6P4F7 1023 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 TRAT1Q6PIZ9 186 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 Q6ZTC4 211 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 EFL1Q7Z2Z2 1120 aaKnown RBP2.87□□□□□ -1.95
SNHG1-202ENST00000535689 UNC93AQ86WB7 457 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 TRIM69Q86WT6 500 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 SYCP3Q8IZU3 236 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 NHLRC2Q8NBF2 726 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ADAD2Q8NCV1 583 aaKnown RBP2.87□□□□□ -1.95
SNHG1-202ENST00000535689 OR10Q1Q8NGQ4 319 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 RNF139Q8WU17 664 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 PIK3R3Q92569 461 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 RIT1Q92963 219 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 MYLPFQ96A32 169 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 AZIN2Q96A70 460 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 SLC45A3Q96JT2 553 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ACCSQ96QU6 501 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 CLEC7AQ9BXN2 247 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 UBXN6Q9BZV1 441 aa2.87□□□□□ -1.95
SNHG1-202ENST00000535689 ST6GALNAC4Q9H4F1 302 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms