RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CPMP14384 443 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 DRD5P21918 477 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 PPICP45877 212 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 KCNJ1P48048 391 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 FABP6P51161 128 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 XKP51811 444 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 IRF8Q02556 426 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 CHIT1Q13231 466 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 SLMAPQ14BN4 828 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 PPA1Q15181 289 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 TSNQ15631 228 aaKnown RBP7.31□□□□□ -1.24
CLIP1-206ENST00000535290 TRIP13Q15645 432 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-206ENST00000535290 STK11Q15831 433 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 ZSWIM7Q19AV6 140 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 SLC22A25Q6T423 547 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 C4orf22Q6V702 233 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 DEF8Q6ZN54 512 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 BHLHA15Q7RTS1 189 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-206ENST00000535290 GALNT10Q86SR1 603 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 GBP7Q8N8V2 638 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-206ENST00000535290 LINC01356Q8N9X3 169 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 OR7G3Q8NG95 312 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 ZNF418Q8TF45 676 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-206ENST00000535290 RGMAQ96B86 450 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 CMTM7Q96FZ5 175 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 SLC35A4Q96G79 324 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 RADILQ96JH8 1075 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 ADGRG7Q96K78 797 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 NAP1L3Q99457 506 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-206ENST00000535290 RTN4RQ9BZR6 473 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 DDX47Q9H0S4 455 aaKnown RBP7.31□□□□□ -1.24
CLIP1-206ENST00000535290 ZBTB26Q9HCK0 441 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 SMYD2Q9NRG4 433 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 GLRX2Q9NS18 164 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 PPP4R1LQ9P1A2 415 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 BCAP29Q9UHQ4 241 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 POU2F3Q9UKI9 436 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 PCDHB10Q9UN67 800 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 PLLPQ9Y342 182 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 PCDHGA11Q9Y5H2 935 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 AP4B1Q9Y6B7 739 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 RYR3Q15413 4870 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 GOLGA8QA0A0J9YX86 632 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 LOC390937A0A1W2PQ73 354 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 GOLGA8OA6NCC3 632 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 ZNF814B7Z6K7 855 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 AKR1B15C9JRZ8 316 aaPredicted RBP7.3□□□□□ -1.24
CLIP1-206ENST00000535290 GOLGA8NF8WBI6 632 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 GOLGA6L19H0YKK7 550 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 GOLGA8RI6L899 631 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 SCO2O43819 266 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 TSPAN2O60636 221 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 LYZL6O75951 148 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 CBX7O95931 251 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 GBAP04062 536 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 FAM58BPP0C7Q3 252 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 ARAFP10398 606 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 ZNF37AP17032 561 aaPredicted RBP7.3□□□□□ -1.24
CLIP1-206ENST00000535290 PIK3R1P27986 724 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 BSGP35613 385 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 MAGEA6P43360 314 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 HSPA7P48741 367 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 VPS41P49754 854 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 EMDP50402 254 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 RAP1GDS1P52306 607 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 ARFIP2P53365 341 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 SARNPP82979 210 aaKnown RBP7.3□□□□□ -1.24
CLIP1-206ENST00000535290 STX5Q13190 355 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 ITGADQ13349 1161 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 LAPTM5Q13571 262 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 DDX39BQ13838 428 aaKnown RBP7.3□□□□□ -1.24
CLIP1-206ENST00000535290 TBCCQ15814 346 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 CCNG2Q16589 344 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 PDK4Q16654 411 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 HIST2H2ACQ16777 129 aaPredicted RBP7.3□□□□□ -1.24
CLIP1-206ENST00000535290 PRICKLE4Q2TBC4 344 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 PAGE2BQ5JRK9 111 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 LGSNQ5TDP6 509 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 HIST2H2AA3Q6FI13 130 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 OR52E8Q6IFG1 317 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 GSTA5Q7RTV2 222 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 CNGA4Q8IV77 575 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 LAS2Q8IYD9 372 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 SVOPLQ8N434 492 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 CEP112Q8N8E3 955 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 MCUQ8NE86 351 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 OR52R1Q8NGF1 315 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 OR2W6PQ8NHA6 318 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 ABHD3Q8WU67 409 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 ANKRD49Q8WVL7 239 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 MRPL24Q96A35 216 aaKnown RBP7.3□□□□□ -1.24
CLIP1-206ENST00000535290 C1GALT1C1Q96EU7 318 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 HES6Q96HZ4 224 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 SIGLEC10Q96LC7 697 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 SORCS2Q96PQ0 1159 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 BRINP2Q9C0B6 783 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 WDR41Q9HAD4 459 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 MAT2BQ9NZL9 334 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 ZNF639Q9UID6 485 aa7.3□□□□□ -1.24
CLIP1-206ENST00000535290 MCTS1Q9ULC4 181 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms