RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 RRAGDQ9NQL2 400 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-215ENST00000533946 PNPOQ9NVS9 261 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 SH3BP4Q9P0V3 963 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 ITGB1BP2Q9UKP3 347 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 WIF1Q9Y5W5 379 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 NF1P21359 2839 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 ABCA4P78363 2273 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 PRRC2AP48634 2157 aaKnown RBP8.73□□□□□ -1.01
SSBP3-215ENST00000533946 SLC28A1O00337 649 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 PLOD2O00469 737 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 ACOX3O15254 700 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 NPHS1O60500 1241 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 SNX4O95219 450 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 EPPINO95925 133 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 NAGAP17050 411 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 IL11P20809 199 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 BGNP21810 368 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 BMP5P22003 454 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 EVI2BP34910 448 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 MPIP34949 423 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 FRKP42685 505 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-215ENST00000533946 ZFP36L2P47974 494 aaKnown RBP8.73□□□□□ -1.01
SSBP3-215ENST00000533946 SERPINB4P48594 390 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 DIO3P55073 304 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 CLDN18P56856 261 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 CLDN20P56880 219 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 WDR4P57081 412 aaKnown RBP8.73□□□□□ -1.01
SSBP3-215ENST00000533946 PHC1P78364 1004 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 NDUFAF6Q330K2 333 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 KRT71Q3SY84 523 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 TNFAIP8L3Q5GJ75 292 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 EXOSC6Q5RKV6 272 aaKnown RBP8.73□□□□□ -1.01
SSBP3-215ENST00000533946 C6orf163Q5TEZ5 329 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 TMEM211Q6ICI0 200 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 SLC30A6Q6NXT4 461 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 ARSKQ6UWY0 536 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 HMGN2P46Q86SG4 172 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 PLCZ1Q86YW0 608 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 ZZZ3Q8IYH5 903 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 GCNT2Q8N0V5 402 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 MREGQ8N565 214 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 OR2M3Q8NG83 312 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 RMND5BQ96G75 393 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-215ENST00000533946 SECISBP2Q96T21 854 aaKnown RBP8.73□□□□□ -1.01
SSBP3-215ENST00000533946 SH3GL2Q99962 352 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 SPOCK3Q9BQ16 436 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 LMF2Q9BU23 707 aaKnown RBP8.73□□□□□ -1.01
SSBP3-215ENST00000533946 TMEM109Q9BVC6 243 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 SERHL2Q9H4I8 314 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 REEP4Q9H6H4 257 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 CXorf36Q9H7Y0 433 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 CHST11Q9NPF2 352 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 MIEF1Q9NQG6 463 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 TAS2R10Q9NYW0 307 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 COQ3Q9NZJ6 369 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 PRODH2Q9UF12 536 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 RAB21Q9UL25 225 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 STK38LQ9Y2H1 464 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 L3MBTL1Q9Y468 752 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 SETD2Q9BYW2 2564 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-215ENST00000533946 ZFHX3Q15911 3703 aa8.73□□□□□ -1.01
SSBP3-215ENST00000533946 HEATR5AQ86XA9 2040 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 A0A087WV62 115 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 CENPVL1A0A0U1RR11 272 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 A0A1W2PPR1 153 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 FIGNL2A6NMB9 653 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 CAPN14A8MX76 684 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 ESPNB1AK53 854 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 PDPK1O15530 556 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 RGS14O43566 566 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 ABCB7O75027 752 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 WDR1O75083 606 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 UTS2O95399 124 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 HOXD4P09016 255 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-215ENST00000533946 DHRS4L1P0CG22 281 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 G6PDP11413 515 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 RPS26P62854 115 aaKnown RBP8.72□□□□□ -1.01
SSBP3-215ENST00000533946 MRPS22P82650 360 aaKnown RBP8.72□□□□□ -1.01
SSBP3-215ENST00000533946 CHI3L2Q15782 390 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 PDCD2Q16342 344 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-215ENST00000533946 NHSL2Q5HYW2 709 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 IL23RQ5VWK5 629 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 TMEM81Q6P7N7 255 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 EMBQ6PCB8 327 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 C22orf34Q6ZV56 151 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 ACAD11Q709F0 780 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 GDF7Q7Z4P5 450 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 RIMKLAQ8IXN7 391 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 DND1Q8IYX4 353 aaKnown RBP8.72□□□□□ -1.01
SSBP3-215ENST00000533946 CLECL1Q8IZS7 167 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 CLYBLQ8N0X4 340 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 FADS6Q8N9I5 356 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 NUP43Q8NFH3 380 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 OR5AK3PQ8NH89 298 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 OR14L1PQ8NHC6 308 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 LINC01560Q8TB33 94 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 ASB5Q8WWX0 329 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 FIG4Q92562 907 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 SLC9A6Q92581 669 aa8.72□□□□□ -1.01
SSBP3-215ENST00000533946 HOXB13Q92826 284 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms