RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 LDAHQ9H6V9 325 aa7.98□□□□□ -1.13
COPB1-210ENST00000533533 WDR55Q9H6Y2 383 aaPredicted RBP7.98□□□□□ -1.13
COPB1-210ENST00000533533 DLL4Q9NR61 685 aa7.98□□□□□ -1.13
COPB1-210ENST00000533533 RASSF1Q9NS23 344 aa7.98□□□□□ -1.13
COPB1-210ENST00000533533 SACM1LQ9NTJ5 587 aa7.98□□□□□ -1.13
COPB1-210ENST00000533533 DDX18Q9NVP1 670 aaKnown RBP7.98□□□□□ -1.13
COPB1-210ENST00000533533 ZNF446Q9NWS9 450 aa7.98□□□□□ -1.13
COPB1-210ENST00000533533 ALKBH4Q9NXW9 302 aa7.98□□□□□ -1.13
COPB1-210ENST00000533533 NOP53Q9NZM5 478 aaKnown RBP7.98□□□□□ -1.13
COPB1-210ENST00000533533 CRIM1Q9NZV1 1036 aa7.98□□□□□ -1.13
COPB1-210ENST00000533533 PRODH2Q9UF12 536 aa7.98□□□□□ -1.13
COPB1-210ENST00000533533 EDARQ9UNE0 448 aa7.98□□□□□ -1.13
COPB1-210ENST00000533533 EXO1Q9UQ84 846 aaKnown RBP7.98□□□□□ -1.13
COPB1-210ENST00000533533 PLEKHA6Q9Y2H5 1048 aa7.98□□□□□ -1.13
COPB1-210ENST00000533533 KIAA1549Q9HCM3 1950 aa7.98□□□□□ -1.13
COPB1-210ENST00000533533 SONP18583 2426 aaKnown RBP7.98□□□□□ -1.13
COPB1-210ENST00000533533 MED12LQ86YW9 2145 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 CAPN14A8MX76 684 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 MYO1GB0I1T2 1018 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 SLCO1B7G3V0H7 640 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 SYT5O00445 386 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 SCAMP2O15127 329 aaKnown RBP7.97□□□□□ -1.13
COPB1-210ENST00000533533 CFLARO15519 480 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 COQ9O75208 318 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 BCAS2O75934 225 aaPredicted RBP7.97□□□□□ -1.13
COPB1-210ENST00000533533 CBX7O95931 251 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 CLPSP04118 112 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 P04436 131 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 ABCB1P08183 1280 aaPredicted RBP7.97□□□□□ -1.13
COPB1-210ENST00000533533 CCL3P10147 92 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 GABRA1P14867 456 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 ENDOUP21128 410 aaKnown RBP7.97□□□□□ -1.13
COPB1-210ENST00000533533 GPX3P22352 226 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 EPHA3P29320 983 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 PEX19P40855 299 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 DNASE1L1P49184 302 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 PRKAG1P54619 331 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 DIO3P55073 304 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 OCRLQ01968 901 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 MGAT2Q10469 447 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 RPS6KA2Q15349 733 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 MPEG1Q2M385 716 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 ZNF385BQ569K4 471 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 WLSQ5T9L3 541 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 CPTPQ5TA50 214 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 RIPPLY2Q5TAB7 128 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 OR7G2Q8NG99 324 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 PIWIL2Q8TC59 973 aaKnown RBP7.97□□□□□ -1.13
COPB1-210ENST00000533533 ZNF675Q8TD23 568 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 NUDT8Q8WV74 236 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 MTERF3Q96E29 417 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 ZBED6CLQ96FA7 236 aaPredicted RBP7.97□□□□□ -1.13
COPB1-210ENST00000533533 CHMP6Q96FZ7 201 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 AMDHD1Q96NU7 426 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 ALPK1Q96QP1 1244 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 PRPF18Q99633 342 aaKnown RBP7.97□□□□□ -1.13
COPB1-210ENST00000533533 DPY30Q9C005 99 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 NXF5Q9H1B4 397 aaKnown RBP7.97□□□□□ -1.13
COPB1-210ENST00000533533 GSX1Q9H4S2 264 aaPredicted RBP7.97□□□□□ -1.13
COPB1-210ENST00000533533 EXO5Q9H790 373 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 MEAF6Q9HAF1 191 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 SLCO1B3Q9NPD5 702 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 EQTNQ9NQ60 294 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 ATAD3AQ9NVI7 634 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 TUBA8Q9NY65 449 aaPredicted RBP7.97□□□□□ -1.13
COPB1-210ENST00000533533 TAS2R9Q9NYW1 312 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 SPRR3Q9UBC9 169 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 B4GALT7Q9UBV7 327 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 HAO1Q9UJM8 370 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 DTX4Q9Y2E6 619 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 RPH3AQ9Y2J0 694 aaPredicted RBP7.97□□□□□ -1.13
COPB1-210ENST00000533533 OR10H1Q9Y4A9 318 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 SNX8Q9Y5X2 465 aa7.97□□□□□ -1.13
COPB1-210ENST00000533533 TRGV5A0A0B4J1U4 118 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 A0A1W2PRB8 838 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 A6NNC1 897 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 HSPB2A8KAH6 182 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 SDHDO14521 159 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 KLF11O14901 512 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 ERN1O75460 977 aaKnown RBP7.96□□□□□ -1.14
COPB1-210ENST00000533533 LAMP1P11279 417 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 PRPS1L1P21108 318 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 S1PR1P21453 382 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 UQCRC1P31930 480 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 SOAT1P35610 550 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 KRT20P35900 424 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 PIGAP37287 484 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 RFX3P48380 749 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 TMED10P49755 219 aaKnown RBP7.96□□□□□ -1.14
COPB1-210ENST00000533533 CDK9P50750 372 aaKnown RBP7.96□□□□□ -1.14
COPB1-210ENST00000533533 DGKQP52824 942 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 ADAM8P78325 824 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 PLCXD2Q0VAA5 305 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 DUSP8Q13202 625 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 ZNHIT3Q15649 155 aaPredicted RBP7.96□□□□□ -1.14
COPB1-210ENST00000533533 HSPB2Q16082 182 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 SPDYE7PQ495Y7 208 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 FLYWCH1Q4VC44 716 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 PRAMEF20Q5VT98 475 aa7.96□□□□□ -1.14
COPB1-210ENST00000533533 CAMKMTQ7Z624 323 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms