RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 CHD3Q12873 2000 aaKnown RBP18.9■□□□□ 0.62
CHKA-206ENST00000531341 CCDC189A1A4V9 331 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 RNF212BA8MTL3 300 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 SHISA8B8ZZ34 492 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 FADS1O60427 444 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 STX2P32856 288 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 EVI2BP34910 448 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 KRT20P35900 424 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 PAFAH1B1P43034 410 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 PLTPP55058 493 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 EEFSECP57772 596 aaKnown RBP18.89■□□□□ 0.61
CHKA-206ENST00000531341 STX5Q13190 355 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 HMBOX1Q6NT76 420 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 LETMD1Q6P1Q0 360 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 STAC2Q6ZMT1 411 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 ZNF611Q8N823 705 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 GBP7Q8N8V2 638 aaPredicted RBP18.89■□□□□ 0.61
CHKA-206ENST00000531341 FBXO25Q8TCJ0 367 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 CAVIN3Q969G5 261 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 TMEM204Q9BSN7 226 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 VPS11Q9H270 941 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 CXorf56Q9H5V9 222 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 ZNF225Q9UK10 706 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 LAMP3Q9UQV4 416 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 ZNF175Q9Y473 711 aa18.89■□□□□ 0.61
CHKA-206ENST00000531341 SVEP1Q4LDE5 3571 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 FAM187AA6NFU0 413 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 HS3ST1O14792 307 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 BCAS2O75934 225 aaPredicted RBP18.88■□□□□ 0.61
CHKA-206ENST00000531341 GNG11P61952 73 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 GUCY2DQ02846 1103 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 DMTNQ08495 405 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 NAB1Q13506 487 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 CLEC12BQ2HXU8 276 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 GGTA1PQ4G0N0 100 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 TCHHL1Q5QJ38 904 aaPredicted RBP18.88■□□□□ 0.61
CHKA-206ENST00000531341 UBAP2Q5T6F2 1119 aaKnown RBP18.88■□□□□ 0.61
CHKA-206ENST00000531341 HEPHL1Q6MZM0 1159 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 KLC3Q6P597 504 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 METTL25Q8N6Q8 603 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 OR7G2Q8NG99 324 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 LILRB1Q8NHL6 650 aaPredicted RBP18.88■□□□□ 0.61
CHKA-206ENST00000531341 UHMK1Q8TAS1 419 aaKnown RBP18.88■□□□□ 0.61
CHKA-206ENST00000531341 SELENOMQ8WWX9 145 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 EXOSC8Q96B26 276 aaKnown RBP18.88■□□□□ 0.61
CHKA-206ENST00000531341 PLSCR4Q9NRQ2 329 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 RNF14Q9UBS8 474 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 ANK2Q01484 3957 aa18.88■□□□□ 0.61
CHKA-206ENST00000531341 IL3P08700 152 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 CHN1P15882 459 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 TYK2P29597 1187 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 CDH13P55290 713 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 RAE1P78406 368 aaKnown RBP18.87■□□□□ 0.61
CHKA-206ENST00000531341 PSG6Q00889 435 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 UAP1Q16222 522 aaPredicted RBP18.87■□□□□ 0.61
CHKA-206ENST00000531341 PRSS53Q2L4Q9 553 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 C10orf62Q5T681 223 aaPredicted RBP18.87■□□□□ 0.61
CHKA-206ENST00000531341 ZDHHC24Q6UX98 284 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 CCDC91Q7Z6B0 441 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 GGNQ86UU5 652 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 RAB3IL1Q8TBN0 382 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 DUSP19Q8WTR2 217 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 AKAP1Q92667 903 aaKnown RBP eCLIP18.87■□□□□ 0.61
CHKA-206ENST00000531341 DTNBP1Q96EV8 351 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 NAPGQ99747 312 aaPredicted RBP18.87■□□□□ 0.61
CHKA-206ENST00000531341 FAIM2Q9BWQ8 316 aa18.87■□□□□ 0.61
CHKA-206ENST00000531341 PCNX3Q9H6A9 2034 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 STX16-NPEPL1H3BU86 382 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 STX16O14662 325 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 GMFGO60234 142 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 ESRRBO95718 433 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 TRA2BP62995 288 aaKnown RBP18.86■□□□□ 0.61
CHKA-206ENST00000531341 VEZF1Q14119 521 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 FGFBP1Q14512 234 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 CTU2Q2VPK5 515 aaKnown RBP18.86■□□□□ 0.61
CHKA-206ENST00000531341 SH2D4BQ5SQS7 431 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 MARCH3Q86UD3 253 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 WFDC8Q8IUA0 241 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 MTBPQ96DY7 904 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 C1GALT1C1Q96EU7 318 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 REG4Q9BYZ8 158 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 BRF2Q9HAW0 419 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 OR10H1Q9Y4A9 318 aa18.86■□□□□ 0.61
CHKA-206ENST00000531341 SGCBQ16585 318 aa18.85■□□□□ 0.61
CHKA-206ENST00000531341 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.85■□□□□ 0.61
CHKA-206ENST00000531341 ERCC6LQ2NKX8 1250 aa18.85■□□□□ 0.61
CHKA-206ENST00000531341 PPP4R4Q6NUP7 873 aa18.85■□□□□ 0.61
CHKA-206ENST00000531341 ERP27Q96DN0 273 aa18.85■□□□□ 0.61
CHKA-206ENST00000531341 NPAS1Q99742 590 aa18.85■□□□□ 0.61
CHKA-206ENST00000531341 XPR1Q9UBH6 696 aa18.85■□□□□ 0.61
CHKA-206ENST00000531341 VPS29Q9UBQ0 182 aa18.85■□□□□ 0.61
CHKA-206ENST00000531341 NBEAL1Q6ZS30 2694 aa18.84■□□□□ 0.61
CHKA-206ENST00000531341 OVOL3O00110 214 aa18.84■□□□□ 0.61
CHKA-206ENST00000531341 PLOD3O60568 738 aa18.84■□□□□ 0.61
CHKA-206ENST00000531341 OR4F21O95013 312 aa18.84■□□□□ 0.61
CHKA-206ENST00000531341 OPN1LWP04000 364 aa18.84■□□□□ 0.61
CHKA-206ENST00000531341 SOD3P08294 240 aa18.84■□□□□ 0.61
CHKA-206ENST00000531341 RPS17P08708 135 aaKnown RBP18.84■□□□□ 0.61
CHKA-206ENST00000531341 PPP3CBP16298 524 aa18.84■□□□□ 0.61
CHKA-206ENST00000531341 SERPINB8P50452 374 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms