RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 FAM180BQ6P0A1 224 aa11□□□□□ -0.65
USF1-208ENST00000528768 KLHL35Q6PF15 583 aa11□□□□□ -0.65
USF1-208ENST00000528768 CASP12Q6UXS9 341 aa11□□□□□ -0.65
USF1-208ENST00000528768 PTCHD4Q6ZW05 846 aa11□□□□□ -0.65
USF1-208ENST00000528768 AHSA2Q719I0 299 aa11□□□□□ -0.65
USF1-208ENST00000528768 TAF8Q7Z7C8 310 aa11□□□□□ -0.65
USF1-208ENST00000528768 P2RY8Q86VZ1 359 aa11□□□□□ -0.65
USF1-208ENST00000528768 FAM20CQ8IXL6 584 aa11□□□□□ -0.65
USF1-208ENST00000528768 GPR32P1Q8NGA4 272 aa11□□□□□ -0.65
USF1-208ENST00000528768 OR4C6Q8NH72 309 aa11□□□□□ -0.65
USF1-208ENST00000528768 OR10G6Q8NH81 332 aa11□□□□□ -0.65
USF1-208ENST00000528768 VANGL1Q8TAA9 524 aaPredicted RBP11□□□□□ -0.65
USF1-208ENST00000528768 TRUB1Q8WWH5 349 aaKnown RBP11□□□□□ -0.65
USF1-208ENST00000528768 JPH3Q8WXH2 748 aaPredicted RBP11□□□□□ -0.65
USF1-208ENST00000528768 BORCS5Q969J3 196 aa11□□□□□ -0.65
USF1-208ENST00000528768 GTPBP3Q969Y2 492 aaKnown RBP11□□□□□ -0.65
USF1-208ENST00000528768 TM4SF19Q96DZ7 209 aa11□□□□□ -0.65
USF1-208ENST00000528768 ELP4Q96EB1 424 aa11□□□□□ -0.65
USF1-208ENST00000528768 OTUB1Q96FW1 271 aaPredicted RBP11□□□□□ -0.65
USF1-208ENST00000528768 SLC46A1Q96NT5 459 aa11□□□□□ -0.65
USF1-208ENST00000528768 TRNT1Q96Q11 434 aaKnown RBP11□□□□□ -0.65
USF1-208ENST00000528768 OR2A14Q96R47 310 aa11□□□□□ -0.65
USF1-208ENST00000528768 ARHGAP9Q9BRR9 750 aa11□□□□□ -0.65
USF1-208ENST00000528768 TEX12Q9BXU0 123 aa11□□□□□ -0.65
USF1-208ENST00000528768 PRRG3Q9BZD7 231 aa11□□□□□ -0.65
USF1-208ENST00000528768 EVA1AQ9H8M9 152 aa11□□□□□ -0.65
USF1-208ENST00000528768 KRCC1Q9NPI7 259 aaPredicted RBP11□□□□□ -0.65
USF1-208ENST00000528768 CNOT2Q9NZN8 540 aaKnown RBP11□□□□□ -0.65
USF1-208ENST00000528768 PTGFRNQ9P2B2 879 aa11□□□□□ -0.65
USF1-208ENST00000528768 CPNE7Q9UBL6 633 aa11□□□□□ -0.65
USF1-208ENST00000528768 PSORS1C1Q9UIG5 152 aa11□□□□□ -0.65
USF1-208ENST00000528768 IFT52Q9Y366 437 aa11□□□□□ -0.65
USF1-208ENST00000528768 BOD1L1Q8NFC6 3051 aa11□□□□□ -0.65
USF1-208ENST00000528768 NUP214P35658 2090 aaPredicted RBP10.99□□□□□ -0.65
USF1-208ENST00000528768 TRBV23OR9-2A0A075B6M9 112 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 A0A0J9YVX5 310 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 A0A1W2PRQ8 180 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 ZAR1LA6NP61 321 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 J3KTA2 159 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 WBP4O75554 376 aaKnown RBP10.99□□□□□ -0.65
USF1-208ENST00000528768 INMTO95050 263 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 GABARAPO95166 117 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 FADS2O95864 444 aaKnown RBP10.99□□□□□ -0.65
USF1-208ENST00000528768 LGI1O95970 557 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 STATHP02808 62 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 CDK1P06493 297 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 ALOX12P18054 663 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 MAGP20916 626 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 ELAVL4P26378 380 aaKnown RBP10.99□□□□□ -0.65
USF1-208ENST00000528768 GP2P55259 537 aaKnown RBP10.99□□□□□ -0.65
USF1-208ENST00000528768 PIGFQ07326 219 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 DGCR6Q14129 220 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 GPR18Q14330 331 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 TBCEQ15813 527 aaPredicted RBP10.99□□□□□ -0.65
USF1-208ENST00000528768 FAM214AQ32MH5 1076 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 CYP27C1Q4G0S4 372 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 UBE2UQ5VVX9 321 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 C18orf63Q68DL7 685 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 FRMPD2BQ6IN97 320 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 TCTN3Q6NUS6 607 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 FBXO42Q6P3S6 717 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 TMEM107Q6UX40 140 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 RRM2BQ7LG56 351 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 VN1R4Q7Z5H5 301 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 ARL14Q8N4G2 192 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 DNAJC22Q8N4W6 341 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 TOR1AIP2Q8NFQ8 470 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 OR9Q2Q8NGE9 314 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 APOBEC4Q8WW27 367 aaKnown RBP10.99□□□□□ -0.65
USF1-208ENST00000528768 SLC38A4Q969I6 547 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 CNRIP1Q96F85 164 aaPredicted RBP10.99□□□□□ -0.65
USF1-208ENST00000528768 KLHDC7BQ96G42 594 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 PRRC1Q96M27 445 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 MS4A4EQ96PG1 132 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 OR2A5Q96R48 311 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 OR7D2Q96RA2 312 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 CCNL2Q96S94 520 aaPredicted RBP10.99□□□□□ -0.65
USF1-208ENST00000528768 NIPSNAP1Q9BPW8 284 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 CCDC3Q9BQI4 270 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 ITPAQ9BY32 194 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 AICDAQ9GZX7 198 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 TWSG1Q9GZX9 223 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 RACGAP1Q9H0H5 632 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 POLR2J3Q9H1A7 115 aaKnown RBP10.99□□□□□ -0.65
USF1-208ENST00000528768 ANKRD19PQ9H560 264 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 ANKHQ9HCJ1 492 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 PALMDQ9NP74 551 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 ACOT13Q9NPJ3 140 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 PAK1IP1Q9NWT1 392 aaPredicted RBP10.99□□□□□ -0.65
USF1-208ENST00000528768 GIN1Q9NXP7 522 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 ACAD8Q9UKU7 415 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 CA5BQ9Y2D0 317 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 KLHL20Q9Y2M5 609 aa10.99□□□□□ -0.65
USF1-208ENST00000528768 USP9YO00507 2555 aaPredicted RBP10.98□□□□□ -0.65
USF1-208ENST00000528768 IRGMA1A4Y4 181 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 PRAMEF25A6NGN4 478 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 CLDN24A6NM45 220 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 SNTNA6NMZ2 147 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 PPM1DO15297 605 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 B4GALT2O60909 372 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms