RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 C14orf105Q9NVL8 296 aa13.77□□□□□ -0.21
ECHDC1-220ENST00000528402 NLGN3Q9NZ94 848 aa13.77□□□□□ -0.21
ECHDC1-220ENST00000528402 MKLN1Q9UL63 735 aa13.77□□□□□ -0.21
ECHDC1-220ENST00000528402 SIT1Q9Y3P8 196 aa13.77□□□□□ -0.21
ECHDC1-220ENST00000528402 RPL36Q9Y3U8 105 aaKnown RBP13.77□□□□□ -0.21
ECHDC1-220ENST00000528402 THADAQ6YHU6 1953 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 A0A0A6YYC8 382 aaPredicted RBP13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 IRGMA1A4Y4 181 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 CLDN24A6NM45 220 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 FAM227AF5H4B4 570 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 I3L1I5 382 aaPredicted RBP13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 ZNF749O43361 778 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 KIAA0513O60268 411 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 CNOT3O75175 753 aaKnown RBP13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 GABARAPO95166 117 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 NID1P14543 1247 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 MMP11P24347 488 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 GIPRP48546 466 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 RGS19P49795 217 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 EEF1A1P68104 462 aaKnown RBP13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 GPLD1P80108 840 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 CDK5Q00535 292 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 ID2Q02363 134 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 SLC13A2Q13183 592 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 NCF4Q15080 339 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 RNLSQ5VYX0 342 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 ZNF730Q6ZMV8 503 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 RASSF6Q6ZTQ3 369 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 PLEKHM3Q6ZWE6 761 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 COMTD1Q86VU5 262 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 KMT5CQ86Y97 462 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 PLXDC1Q8IUK5 500 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 FAM26EQ8N5C1 309 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 GPR151Q8TDV0 419 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 OIT3Q8WWZ8 545 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 ZG16BQ96DA0 208 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 ITPAQ9BY32 194 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 POLDIP3Q9BY77 421 aaKnown RBP13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 LIN28AQ9H9Z2 209 aaKnown RBP13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 SLC24A3Q9HC58 644 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 SOHLH2Q9NX45 425 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 CACNA1IQ9P0X4 2223 aa13.76□□□□□ -0.21
ECHDC1-220ENST00000528402 A0A087WUU8 490 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 SYNDIG1LA6NDD5 238 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 K7ESF4 209 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 HCRTR1O43613 425 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 BRINP1O60477 761 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 GABRA3P34903 492 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 MAP2K4P45985 399 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 GSSP48637 474 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 MASP1P48740 699 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 PPM1FP49593 454 aaPredicted RBP13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 CSNK1EP49674 416 aaKnown RBP13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 PSMD4P55036 377 aaKnown RBP13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 ZP2Q05996 745 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 TMEM44Q2T9K0 475 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 DEFB133Q30KQ1 61 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 DEFB110Q30KQ9 67 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 YOD1Q5VVQ6 348 aaPredicted RBP13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 CCDC81Q6ZN84 652 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 ZNF836Q6ZNA1 936 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 C11orf74Q86VG3 221 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 P2RY8Q86VZ1 359 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 CROCCP3Q8IVE0 287 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 CLIP4Q8N3C7 705 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 RIT1Q92963 219 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 SLC41A3Q96GZ6 507 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 DGAT2Q96PD7 388 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 TGM7Q96PF1 710 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 SH3GL3Q99963 347 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 NAA50Q9GZZ1 169 aaKnown RBP13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 QRSL1Q9H0R6 528 aaKnown RBP13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 TMEM74BQ9NUR3 256 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 SEMA5BQ9P283 1151 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 LRIT1Q9P2V4 623 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 AASSQ9UDR5 926 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 CHST2Q9Y4C5 530 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 MMACHCQ9Y4U1 282 aa13.75□□□□□ -0.21
ECHDC1-220ENST00000528402 TRAPPC13A5PLN9 417 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 SOX1O00570 391 aaPredicted RBP13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 BCAS1O75363 584 aaPredicted RBP13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 ZIC2O95409 532 aaPredicted RBP13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 FADS2O95864 444 aaKnown RBP13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 CBX7O95931 251 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 GLB1P16278 677 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 S1PR1P21453 382 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 FUT4P22083 530 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 FPR3P25089 353 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 PSMB9P28065 219 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 SLC15A1P46059 708 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 STT3AP46977 705 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 FNTBP49356 437 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 ST3GAL4Q11206 333 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 DCTN2Q13561 401 aaKnown RBP13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 IRF3Q14653 427 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 GPR68Q15743 365 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 PLAG1Q6DJT9 500 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 MBOAT2Q6ZWT7 520 aa13.74□□□□□ -0.21
ECHDC1-220ENST00000528402 OLIG3Q7RTU3 272 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms