RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 PTGER4P35408 488 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 MAP3K8P41279 467 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 NUP107P57740 925 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 CRYZQ08257 329 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 EIPR1Q53HC9 387 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 NHSL2Q5HYW2 709 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 C1orf185Q5T7R7 199 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 RTL6Q6ICC9 239 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 RIMKLAQ8IXN7 391 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 FAM83FQ8NEG4 500 aaPredicted RBP24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 PPP1R36Q96LQ0 422 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 MS4A4EQ96PG1 132 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 SERHLQ9NQF3 203 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 RNF6Q9Y252 685 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 NOTCH2Q04721 2471 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 CRYBG3Q68DQ2 2970 aa24.03■■□□□ 1.44
TSPAN4-217ENST00000527644 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 HNRNPRO43390 633 aaKnown RBP24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 KCNH1O95259 989 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 EFNA1P20827 205 aaPredicted RBP24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 EVI2BP34910 448 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 GAS1P54826 345 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 CLDN8P56748 225 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 C21orf58P58505 322 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 PRR5P85299 388 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 CASP8Q14790 479 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 WIPI1Q5MNZ9 446 aaPredicted RBP24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 VASNQ6EMK4 673 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 ZCCHC12Q6PEW1 402 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 SZRD1Q7Z422 152 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 KRTCAP2Q8N6L1 136 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 GPR151Q8TDV0 419 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 OR5P2Q8WZ92 322 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 GIMAP5Q96F15 307 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 TIMP4Q99727 224 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 NKIRAS1Q9NYS0 192 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 ABCG2Q9UNQ0 655 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 SLC6A5Q9Y345 797 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 CELSR2Q9HCU4 2923 aa24.02■■□□□ 1.44
TSPAN4-217ENST00000527644 AHRRA9YTQ3 701 aa24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 NKX2-2O95096 273 aa24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 GLI4P10075 376 aa24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 CHRNB4P30926 498 aa24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 LSM12Q3MHD2 195 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 YRDCQ86U90 279 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 PM20D2Q8IYS1 436 aa24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 ULK2Q8IYT8 1036 aa24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 LRRC34Q8IZ02 419 aa24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 MGARPQ8TDB4 240 aa24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 BHLHE41Q9C0J9 482 aaPredicted RBP24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 OR2B2Q9GZK3 357 aa24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 SIRT3Q9NTG7 399 aaPredicted RBP24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 PNPOQ9NVS9 261 aa24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 THAP1Q9NVV9 213 aa24.01■■□□□ 1.43
TSPAN4-217ENST00000527644 CACNA1CQ13936 2221 aa24■■□□□ 1.43
TSPAN4-217ENST00000527644 FADS1O60427 444 aa24■■□□□ 1.43
TSPAN4-217ENST00000527644 BMP7P18075 431 aa24■■□□□ 1.43
TSPAN4-217ENST00000527644 GCKP35557 465 aa24■■□□□ 1.43
TSPAN4-217ENST00000527644 LILRB4Q8NHJ6 448 aa24■■□□□ 1.43
TSPAN4-217ENST00000527644 PSMA8Q8TAA3 256 aa24■■□□□ 1.43
TSPAN4-217ENST00000527644 PIK3R3Q92569 461 aa24■■□□□ 1.43
TSPAN4-217ENST00000527644 SLC9A6Q92581 669 aa24■■□□□ 1.43
TSPAN4-217ENST00000527644 ABTB1Q969K4 478 aaPredicted RBP24■■□□□ 1.43
TSPAN4-217ENST00000527644 FAM120BQ96EK7 910 aaKnown RBP24■■□□□ 1.43
TSPAN4-217ENST00000527644 NUF2Q9BZD4 464 aa24■■□□□ 1.43
TSPAN4-217ENST00000527644 PRDM14Q9GZV8 571 aa24■■□□□ 1.43
TSPAN4-217ENST00000527644 SDHAF3Q9NRP4 125 aa24■■□□□ 1.43
TSPAN4-217ENST00000527644 FAM120CQ9NX05 1096 aaKnown RBP24■■□□□ 1.43
TSPAN4-217ENST00000527644 GXYLT2A0PJZ3 443 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 FAM47E-STBD1D6RA91 191 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 ACTL6AO96019 429 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 SRD5A2P31213 254 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 RFX3P48380 749 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 PRIM2P49643 509 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 CLK3P49761 638 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 SF3B4Q15427 424 aaKnown RBP eCLIP23.99■■□□□ 1.434e-7■■■■■ 33.9
TSPAN4-217ENST00000527644 MFSD12Q6NUT3 480 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 CAMKMTQ7Z624 323 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 TRIM42Q8IWZ5 723 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 OR10Q1Q8NGQ4 319 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 OR14L1PQ8NHC6 308 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 RAB3IL1Q8TBN0 382 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 NUDT8Q8WV74 236 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 MARVELD3Q96A59 401 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 RMND5BQ96G75 393 aaPredicted RBP23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 DUSP26Q9BV47 211 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 UGT2B28Q9BY64 529 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 RUBCNLQ9H714 662 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 MEAF6Q9HAF1 191 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 ZCCHC3Q9NUD5 404 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 FBXL2Q9UKC9 423 aa23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 MRPS18CQ9Y3D5 142 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-217ENST00000527644 ITPR2Q14571 2701 aa23.98■■□□□ 1.43
TSPAN4-217ENST00000527644 ALOX5P09917 674 aa23.98■■□□□ 1.43
TSPAN4-217ENST00000527644 ACP2P11117 423 aa23.98■■□□□ 1.43
TSPAN4-217ENST00000527644 DIO3P55073 304 aa23.98■■□□□ 1.43
TSPAN4-217ENST00000527644 AGBL2Q5U5Z8 902 aa23.98■■□□□ 1.43
TSPAN4-217ENST00000527644 ATG16L1Q676U5 607 aa23.98■■□□□ 1.43
TSPAN4-217ENST00000527644 OR5M10Q6IEU7 315 aa23.98■■□□□ 1.43
TSPAN4-217ENST00000527644 CCDC71Q8IV32 467 aaPredicted RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms