RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 PRRT1Q99946 306 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 USB1Q9BQ65 265 aaKnown RBP6.89□□□□□ -1.31
CTNND1-216ENST00000527467 SLCO5A1Q9H2Y9 848 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 LYRM2Q9NU23 88 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-216ENST00000527467 DUS2Q9NX74 493 aaKnown RBP6.89□□□□□ -1.31
CTNND1-216ENST00000527467 NKX1-2Q9UD57 310 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-216ENST00000527467 PCDHGA9Q9Y5G4 932 aaKnown RBP6.89□□□□□ -1.31
CTNND1-216ENST00000527467 NEMP2A6NFY4 417 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 ARPC1BO15143 372 aaKnown RBP6.89□□□□□ -1.31
CTNND1-216ENST00000527467 UPK1BO75841 260 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 IL33O95760 270 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 PDGFAP04085 211 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 CFHP08603 1231 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 AKAIN1P0CW23 69 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 BCKDHBP21953 392 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 OR1D2P34982 312 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 SLC7A9P82251 487 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 KCNC4Q03721 635 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 MEF2DQ14814 521 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 SPIN4Q56A73 249 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 DESI1Q6ICB0 168 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 REEP3Q6NUK4 255 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 TRMT10BQ6PF06 316 aaKnown RBP6.89□□□□□ -1.31
CTNND1-216ENST00000527467 ZNF546Q86UE3 836 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 TMEM130Q8N3G9 435 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 SIGLECL1Q8N7X8 197 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 RELL2Q8NC24 303 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-216ENST00000527467 SIMC1Q8NDZ2 872 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 VN1R2Q8NFZ6 395 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 OR2T33Q8NG76 320 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 OR1M1Q8NGA1 313 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 OR8J1Q8NGP2 316 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 OR13C2Q8NGS9 318 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 LMX1AQ8TE12 382 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 MUS81Q96NY9 551 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 DGAT2Q96PD7 388 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 MRPS30Q9NP92 439 aaKnown RBP6.89□□□□□ -1.31
CTNND1-216ENST00000527467 RYDENQ9NUL5 291 aaKnown RBP6.89□□□□□ -1.31
CTNND1-216ENST00000527467 VPS29Q9UBQ0 182 aa6.89□□□□□ -1.31
CTNND1-216ENST00000527467 ENPP3O14638 875 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 PHYHO14832 338 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 ZNF780AO75290 641 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-216ENST00000527467 FBXO24O75426 580 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 ZIC2O95409 532 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-216ENST00000527467 GOT2P00505 430 aaKnown RBP6.88□□□□□ -1.31
CTNND1-216ENST00000527467 CDK4P11802 303 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 CNR1P21554 472 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 ID4P47928 161 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 MARCKSL1P49006 195 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 HLCSP50747 726 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 GRIK5Q16478 980 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 DUSP6Q16828 381 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 NKPD1Q17RQ9 610 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 MYLK3Q32MK0 819 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 ESCO2Q56NI9 601 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 TRNP1Q6NT89 227 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 ADAM5Q6NVV9 412 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 TPRA1Q86W33 373 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 WFIKKN2Q8TEU8 576 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 SLC22A17Q8WUG5 538 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 ZBTB8AQ96BR9 441 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 TLCD1Q96CP7 247 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 WDR26Q9H7D7 661 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 TAS2R14Q9NYV8 317 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 KLRF1Q9NZS2 232 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 SLC17A6Q9P2U8 582 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 TCAF1Q9Y4C2 921 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 UBIAD1Q9Y5Z9 338 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-216ENST00000527467 SLC22A31A6NKX4 558 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 PRR33A8MZF0 331 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 NDUFV2P19404 249 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 GABRR2P28476 465 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 NKX3-2P78367 333 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 ABHD13Q7L211 337 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 SYT13Q7L8C5 426 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 PIGZQ86VD9 579 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 OR10K1Q8NGX5 313 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 ZUFSPQ96AP4 578 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 RGMAQ96B86 450 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 RAB3CQ96E17 227 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 OR2M2Q96R28 347 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 GDF15Q99988 308 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 CMSS1Q9BQ75 279 aaKnown RBP6.88□□□□□ -1.31
CTNND1-216ENST00000527467 SRRQ9GZT4 340 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 GDE1Q9NZC3 331 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 TMEM181Q9P2C4 612 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 RPH3ALQ9UNE2 315 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 ZNF736B4DX44 427 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-216ENST00000527467 ACOT7O00154 380 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 CER1O95813 267 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 ARP10275 920 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 PAX6P26367 422 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 PTGER3P43115 390 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 NFATC3Q12968 1075 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 CCINQ13939 588 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 MSMO1Q15800 293 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 PARP15Q460N3 678 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 FBXO48Q5FWF7 155 aa6.88□□□□□ -1.31
CTNND1-216ENST00000527467 LIPJQ5W064 366 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms