RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 GID4Q8IVV7 300 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 BBS10Q8TAM1 723 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 SAMD8Q96LT4 415 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 PRRC1Q96M27 445 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 C1QTNF6Q9BXI9 259 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 SYNDIG1Q9H7V2 258 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 TAS2R3Q9NYW6 316 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 IRAK3Q9Y616 596 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 CCDC88CQ9P219 2028 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 GRM6O15303 877 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 RNF13O43567 381 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 HRO43593 1189 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 FZD6O60353 706 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 LALBAP00709 142 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 NDUFV2P19404 249 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 PDHA2P29803 388 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 SLC6A11P48066 632 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 SCRN3Q0VDG4 424 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 PUM1Q14671 1186 aaKnown RBP eCLIP8.5□□□□□ -1.05
CSMD1-212ENST00000523387 METTL11BQ5VVY1 283 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 C9orf131Q5VYM1 1079 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 LRRN1Q6UXK5 716 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 SLCO4C1Q6ZQN7 724 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 RNF180Q86T96 592 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 LAS2Q8IYD9 372 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 OR6T1Q8NGN1 323 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 OR5W2Q8NH69 310 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 ZNF480Q8WV37 535 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 PDXPQ96GD0 296 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 ZC3HAV1LQ96H79 300 aaKnown RBP8.5□□□□□ -1.05
CSMD1-212ENST00000523387 COPS3Q9UNS2 423 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 RCE1Q9Y256 329 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 LSM2Q9Y333 95 aaKnown RBP8.5□□□□□ -1.05
CSMD1-212ENST00000523387 Q9Y3F1 56 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 YIPF1Q9Y548 306 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 TRBV5-4A0A0C4DH59 114 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 KRBOX1C9JBD0 128 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 SMAD9O15198 467 aaKnown RBP8.5□□□□□ -1.05
CSMD1-212ENST00000523387 HOXA2O43364 376 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 PEX14O75381 377 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 GCM2O75603 506 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-212ENST00000523387 SPDEFO95238 335 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 EIF4EP06730 217 aaKnown RBP8.5□□□□□ -1.05
CSMD1-212ENST00000523387 CKBP12277 381 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 LAMP2P13473 410 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 ACP5P13686 325 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 ZNF30P17039 623 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 OMPP47874 163 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 CTSCP53634 463 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 C4orf46Q504U0 113 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 TMEM201Q5SNT2 666 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 LIN54Q6MZP7 749 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 CD300LGQ6UXG3 332 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 MS4A15Q8N5U1 240 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 WFDC5Q8TCV5 224 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 ST8SIA2Q92186 375 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 FCRL1Q96LA6 429 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 ARHGAP9Q9BRR9 750 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 WDR26Q9H7D7 661 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 PPP1R3EQ9H7J1 279 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 IFT46Q9NQC8 304 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 GLS2Q9UI32 602 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 A0A0G2JPF8 293 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 HNRNPCL3B7ZW38 293 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 H3BNC9 293 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 GFYI3L273 518 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 GPR171O14626 319 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 IFNGP01579 166 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 HNRNPCL4P0DMR1 293 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 CXCL3P19876 107 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 CD70P32970 193 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 RPL4P36578 427 aaKnown RBP8.49□□□□□ -1.05
CSMD1-212ENST00000523387 MTNR1BP49286 362 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 TAS2R43P59537 309 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 FAM46CQ5VWP2 391 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 ELP2Q6IA86 826 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 C10orf53Q8N6V4 93 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 OR6M1Q8NGM8 313 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 SUN3Q8TAQ9 357 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 RGMAQ96B86 450 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 PPP1R16AQ96I34 528 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 CD180Q99467 661 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 QRSL1Q9H0R6 528 aaKnown RBP8.49□□□□□ -1.05
CSMD1-212ENST00000523387 ASB6Q9NWX5 421 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 RPS6KB2Q9UBS0 482 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 ELF5Q9UKW6 265 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-212ENST00000523387 PLCL2Q9UPR0 1127 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 AK6Q9Y3D8 172 aaKnown RBP8.49□□□□□ -1.05
CSMD1-212ENST00000523387 GOLGB1Q14789 3259 aaKnown RBP8.49□□□□□ -1.05
CSMD1-212ENST00000523387 TMEM202A6NGA9 273 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 FAM25EA8MYX2 175 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 SOCS6O14544 535 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 MTRF1O75570 445 aaKnown RBP8.49□□□□□ -1.05
CSMD1-212ENST00000523387 KLHL18O94889 574 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 RPN2P04844 631 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 ACSM4P0C7M7 580 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 EDNRAP25101 427 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 SLC6A1P30531 599 aa8.49□□□□□ -1.05
CSMD1-212ENST00000523387 FGF9P31371 208 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-212ENST00000523387 VEGFCP49767 419 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms