RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 EPRSP07814 1512 aaKnown RBP2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 CDK13Q14004 1512 aaKnown RBP2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 KDM5DQ9BY66 1539 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 GAPVD1Q14C86 1478 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 NAIPQ13075 1403 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 PTPRKQ15262 1439 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 CHD1O14646 1710 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 GON4LQ3T8J9 2241 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 TRPM1Q7Z4N2 1603 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 UNC13BO14795 1591 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 TRGV8A0A0C4DH27 118 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 CLRN2A0PK11 232 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 TRIM64CA6NLI5 447 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 GPR89AB7ZAQ6 455 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 H0YCG3 227 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 EI24O14681 340 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 ZSCAN12O43309 604 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 DUX1O43812 170 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 JAK2O60674 1132 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 ZG16O60844 167 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 RAMP1O60894 148 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 SORBS2O94875 1100 aaKnown RBP2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 MELTFP08582 738 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 GPR89BP0CG08 455 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 PDHBP11177 359 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 PRG2P13727 222 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 HNF1AP20823 631 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 PSMA5P28066 241 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 TAGLN2P37802 199 aaKnown RBP2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 RGS4P49798 205 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 PPT1P50897 306 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 RPS6P62753 249 aaKnown RBP2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 SRYQ05066 204 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 IL24Q13007 206 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 PDK4Q16654 411 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 ECSCRQ19T08 205 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 MAJINQ3KP22 176 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 C9orf66Q5T8R8 295 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 FAM219BQ5XKK7 198 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 PRR5LQ6MZQ0 368 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 CASC1Q6TDU7 716 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 RGS9BPQ6ZS82 235 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 STOX1Q6ZVD7 989 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 LUZP1Q86V48 1076 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 ZNF679Q8IYX0 411 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 METTL4Q8N3J2 472 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 LRRC15Q8TF66 581 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 EMG1Q92979 244 aaKnown RBP2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 PINX1Q96BK5 328 aaKnown RBP2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 DNAJA3Q96EY1 480 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 TSPAN18Q96SJ8 248 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 MYCBPQ99417 103 aaPredicted RBP2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 FAM173AQ9BQD7 235 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 ALG12Q9BV10 488 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 COMMD4Q9H0A8 199 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 MOB1AQ9H8S9 216 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 GNB4Q9HAV0 340 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 DCAF13Q9NV06 445 aaKnown RBP2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 UTP6Q9NYH9 597 aaKnown RBP2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 KLRF1Q9NZS2 232 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 SMC3Q9UQE7 1217 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 USP16Q9Y5T5 823 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 FKBP7Q9Y680 259 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 CEP152O94986 1710 aa2.76□□□□□ -1.97
HMGN1P28-201ENST00000521340 ABCA8O94911 1581 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 MBLAC1A4D2B0 266 aaPredicted RBP2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 ZSCAN5BA6NJL1 495 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 K7EQM0 130 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 BTN3A3O00478 584 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 CLDN5O00501 218 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 MCF2LO15068 1137 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 MAGEB3O15480 346 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 SNNO75324 88 aaPredicted RBP2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 TM7SF2O76062 418 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 PDE5AO76074 875 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 VENTXO95231 258 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 JCHAINP01591 159 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 OPN1MWP04001 364 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 ADORA3P0DMS8 318 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 OPN1MW2P0DN77 364 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 OPN1MW3P0DN78 364 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 UQCRBP14927 111 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 UQCRC2P22695 453 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 LMO2P25791 158 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 RPL4P36578 427 aaKnown RBP2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 BRCC3P46736 316 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 STK19P49842 368 aaPredicted RBP2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 CD300CQ08708 224 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 HYAL1Q12794 435 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 MS4A18Q3C1V0 323 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 CYBRD1Q53TN4 286 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 RABGAP1LQ5R372 815 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 FAM182AQ5T1J6 154 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 AGAP7PQ5VUJ5 663 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 BSPRYQ5W0U4 402 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 ZNF343Q6P1L6 599 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 CENPUQ71F23 418 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 ANKRD37Q7Z713 158 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 Q8N377 158 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 SAMD12Q8N8I0 201 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms