RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 PCED1BQ96HM7 432 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 FUBP3Q96I24 572 aaKnown RBP eCLIP12.76□□□□□ -0.37
PABPC1-208ENST00000519004 PKP4Q99569 1192 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 IFT27Q9BW83 186 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 FAIM2Q9BWQ8 316 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 POLR2J3Q9H1A7 115 aaKnown RBP12.76□□□□□ -0.37
PABPC1-208ENST00000519004 ZFP57Q9NU63 452 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 FKBPLQ9UIM3 349 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 FXYD6-FXYD2A0A087WZ82 144 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 TMEM218A2RU14 115 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 NPIPB8E9PQR5 432 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 SOCS7O14512 581 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 PRMT3O60678 531 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 EFCAB14O75071 495 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 RECQL4O94761 1208 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 IFNGR1P15260 489 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 AKAP5P24588 427 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 OR2B11Q5JQS5 317 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 ACSM5Q6NUN0 579 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 PGBD2Q6P3X8 592 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 GLDNQ6ZMI3 551 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-208ENST00000519004 MBOAT1Q6ZNC8 495 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 BEND4Q6ZU67 534 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 MOB3CQ70IA8 216 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 GLT6D1Q7Z4J2 308 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 OR6K3Q8NGY3 331 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 TRMT10AQ8TBZ6 339 aaKnown RBP12.75□□□□□ -0.37
PABPC1-208ENST00000519004 CSGALNACT1Q8TDX6 532 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 EXOSC8Q96B26 276 aaKnown RBP12.75□□□□□ -0.37
PABPC1-208ENST00000519004 PAWRQ96IZ0 340 aaKnown RBP12.75□□□□□ -0.37
PABPC1-208ENST00000519004 WDR77Q9BQA1 342 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-208ENST00000519004 DUSP26Q9BV47 211 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 FXYD6Q9H0Q3 95 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 QRSL1Q9H0R6 528 aaKnown RBP12.75□□□□□ -0.37
PABPC1-208ENST00000519004 P2RY12Q9H244 342 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 ST3GAL5Q9UNP4 418 aa12.75□□□□□ -0.37
PABPC1-208ENST00000519004 MYBPHLA2RUH7 354 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 GPR39O43194 453 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 OR10H3O60404 316 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 RAD1O60671 282 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 UBL3O95164 117 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 EDNRBP24530 442 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 IGFBP6P24592 240 aaPredicted RBP12.74□□□□□ -0.37
PABPC1-208ENST00000519004 PSMA3P25788 255 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 ELAVL4P26378 380 aaKnown RBP12.74□□□□□ -0.37
PABPC1-208ENST00000519004 SLC1A3P43003 542 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 OR10A3P58181 314 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 LILRA4P59901 499 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 SHC2P98077 582 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 EEF1A2Q05639 463 aaKnown RBP12.74□□□□□ -0.37
PABPC1-208ENST00000519004 MBTPS1Q14703 1052 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 ATP13A5Q4VNC0 1218 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 MTFR2Q6P444 385 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 ZNF613Q6PF04 617 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 DMRTC2Q8IXT2 367 aaPredicted RBP12.74□□□□□ -0.37
PABPC1-208ENST00000519004 RNF175Q8N4F7 328 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 PNPLA2Q96AD5 504 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 RGMAQ96B86 450 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 ZFP3Q96NJ6 502 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 FUZQ9BT04 418 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 CTPS2Q9NRF8 586 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 ZNF69Q9UC07 566 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 PRKAB1Q9Y478 270 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 BACE2Q9Y5Z0 518 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 ABHD14A-ACY1A0A1B0GW23 586 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 CARNS1A5YM72 827 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 ARPC1BO15143 372 aaKnown RBP12.74□□□□□ -0.37
PABPC1-208ENST00000519004 GPR37O15354 613 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 ICOSLGO75144 302 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 POMCP01189 267 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 IFNW1P05000 195 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 GP1BAP07359 652 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 MUC1P15941 1255 aaPredicted RBP12.74□□□□□ -0.37
PABPC1-208ENST00000519004 CTSOP43234 321 aaPredicted RBP12.74□□□□□ -0.37
PABPC1-208ENST00000519004 BOP1Q14137 746 aaKnown RBP12.74□□□□□ -0.37
PABPC1-208ENST00000519004 SF1Q15637 639 aaKnown RBP12.74□□□□□ -0.37
PABPC1-208ENST00000519004 C9orf152Q5JTZ5 239 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 SFXN4Q6P4A7 337 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 ANGPTL8Q6UXH0 198 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 IKBIPQ70UQ0 350 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 SPAG16Q8N0X2 631 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 FBXO15Q8NCQ5 510 aaPredicted RBP12.74□□□□□ -0.37
PABPC1-208ENST00000519004 TMEM185AQ8NFB2 350 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 WNT2BQ93097 391 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 ZDHHC12Q96GR4 267 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 PBX4Q9BYU1 374 aa12.74□□□□□ -0.37
PABPC1-208ENST00000519004 POLR1EQ9GZS1 481 aaKnown RBP12.74□□□□□ -0.37
PABPC1-208ENST00000519004 IRGMA1A4Y4 181 aa12.73□□□□□ -0.37
PABPC1-208ENST00000519004 SLC9B1P1A6NJY1 282 aa12.73□□□□□ -0.37
PABPC1-208ENST00000519004 PRODHO43272 600 aa12.73□□□□□ -0.37
PABPC1-208ENST00000519004 PSMB1P20618 241 aaKnown RBP12.73□□□□□ -0.37
PABPC1-208ENST00000519004 CNR1P21554 472 aa12.73□□□□□ -0.37
PABPC1-208ENST00000519004 DDX6P26196 483 aaKnown RBP eCLIP12.73□□□□□ -0.375e-38■■□□□ 11.5
PABPC1-208ENST00000519004 HOXA11P31270 313 aaPredicted RBP12.73□□□□□ -0.37
PABPC1-208ENST00000519004 PGDP52209 483 aa12.73□□□□□ -0.37
PABPC1-208ENST00000519004 UBE2IP63279 158 aaKnown RBP12.73□□□□□ -0.37
PABPC1-208ENST00000519004 EEF1A1P68104 462 aaKnown RBP12.73□□□□□ -0.37
PABPC1-208ENST00000519004 RING1Q06587 406 aa12.73□□□□□ -0.37
PABPC1-208ENST00000519004 IRF5Q13568 498 aa12.73□□□□□ -0.37
PABPC1-208ENST00000519004 GINS1Q14691 196 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms