RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 HECTD1Q9ULT8 2610 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 RNF103-CHMP3A0A140T963 221 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 GNB5O14775 395 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 PSMD4P55036 377 aaKnown RBP12.77□□□□□ -0.37
USP46-209ENST00000514536 CASP9P55211 416 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 RPS26P62854 115 aaKnown RBP12.77□□□□□ -0.37
USP46-209ENST00000514536 SNTA1Q13424 505 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 SLC10A1Q14973 349 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 FNDC7Q5VTL7 733 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 FIGNL1Q6PIW4 674 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 BNC2Q6ZN30 1099 aaPredicted RBP12.77□□□□□ -0.37
USP46-209ENST00000514536 GHDCQ8N2G8 530 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 FAM109AQ8N4B1 249 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 COX18Q8N8Q8 333 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 CDS1Q92903 461 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 ZNF597Q96LX8 424 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 GNRHR2Q96P88 292 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 PANX1Q96RD7 426 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 OSBPL11Q9BXB4 747 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 PIGUQ9H490 435 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 CCDC134Q9H6E4 229 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 ZDHHC11Q9H8X9 412 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 FLRT3Q9NZU0 649 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 KCNE3Q9Y6H6 103 aa12.77□□□□□ -0.37
USP46-209ENST00000514536 PRRC2CQ9Y520 2896 aaKnown RBP12.76□□□□□ -0.37
USP46-209ENST00000514536 SVILO95425 2214 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 RP1L1Q8IWN7 2480 aaPredicted RBP12.76□□□□□ -0.37
USP46-209ENST00000514536 A0A1B0GTH9 108 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 FAM234BA2RU67 622 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 CCDC154A6NI56 674 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 KCNK2O95069 426 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 UTS2O95399 124 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 GSNP06396 782 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 CELA3AP09093 270 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 NCF2P19878 526 aaPredicted RBP12.76□□□□□ -0.37
USP46-209ENST00000514536 MATN1P21941 496 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 CDKN2CP42773 168 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 MRPL19P49406 292 aaKnown RBP12.76□□□□□ -0.37
USP46-209ENST00000514536 MAN2A2P49641 1150 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 POU6F2P78424 691 aaPredicted RBP12.76□□□□□ -0.37
USP46-209ENST00000514536 RBPJQ06330 500 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 CCNJQ5T5M9 372 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 ANGPTL8Q6UXH0 198 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 ZNF621Q6ZSS3 439 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 OR1J4Q8NGS1 313 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 GOT1L1Q8NHS2 421 aaPredicted RBP12.76□□□□□ -0.37
USP46-209ENST00000514536 FAM110BQ8TC76 370 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 STON2Q8WXE9 905 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 VPS33AQ96AX1 596 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 TMEM41AQ96HV5 264 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 OR7D2Q96RA2 312 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 STACQ99469 402 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 SIKE1Q9BRV8 207 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 SLC35A5Q9BS91 424 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 BTBD2Q9BX70 525 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 DUSP22Q9NRW4 184 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 FBXO34Q9NWN3 711 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 GIN1Q9NXP7 522 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 EML6Q6ZMW3 1958 aa12.76□□□□□ -0.37
USP46-209ENST00000514536 NUP214P35658 2090 aaPredicted RBP12.75□□□□□ -0.37
USP46-209ENST00000514536 COL12A1Q99715 3063 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 SCO2O43819 266 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 FADS1O60427 444 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 KRT16P08779 473 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 TROVE2P10155 538 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP46-209ENST00000514536 GDF1P27539 372 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 CHI3L1P36222 383 aaPredicted RBP12.75□□□□□ -0.37
USP46-209ENST00000514536 LRRC74AQ0VAA2 488 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 ESPL1Q14674 2120 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 TIGD2Q4W5G0 525 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 TIGD3Q6B0B8 471 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 FGD2Q7Z6J4 655 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 ZAR1Q86SH2 424 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 SPPL2CQ8IUH8 684 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 FUNDC1Q8IVP5 155 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 OR5D16Q8NGK9 328 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 RNF138Q8WVD3 245 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 SLC35G5Q96KT7 338 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 TMEM120AQ9BXJ8 343 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 SERHL2Q9H4I8 314 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 ZNF703Q9H7S9 590 aaPredicted RBP12.75□□□□□ -0.37
USP46-209ENST00000514536 SERHLQ9NQF3 203 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 B4GALT7Q9UBV7 327 aa12.75□□□□□ -0.37
USP46-209ENST00000514536 NINQ8N4C6 2090 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 RFXANKO14593 260 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 SNPHO15079 494 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 TRAPPC6AO75865 159 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 SOX30O94993 753 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 C1QCP02747 245 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 EVI2BP34910 448 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 ATP4BP51164 291 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 GAS1P54826 345 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 SRSF1Q07955 248 aaKnown RBP eCLIP12.74□□□□□ -0.37
USP46-209ENST00000514536 SQLEQ14534 574 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 GRAMD1BQ3KR37 738 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 AGKQ53H12 422 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 SAXO2Q658L1 398 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 OR5M10Q6IEU7 315 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 CGB2Q6NT52 195 aa12.74□□□□□ -0.37
USP46-209ENST00000514536 CHERPQ8IWX8 916 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms