RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GCGRP47871 477 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 IDH2P48735 452 aaKnown RBP13.91□□□□□ -0.18
VCAN-211ENST00000513984 RGS8P57771 180 aaPredicted RBP13.91□□□□□ -0.18
VCAN-211ENST00000513984 TAS2R41P59536 307 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 EEF1A1P68104 462 aaKnown RBP13.91□□□□□ -0.18
VCAN-211ENST00000513984 POU6F2P78424 691 aaPredicted RBP13.91□□□□□ -0.18
VCAN-211ENST00000513984 ZNF155Q12901 538 aaPredicted RBP13.91□□□□□ -0.18
VCAN-211ENST00000513984 SRSF5Q13243 272 aaKnown RBP13.91□□□□□ -0.18
VCAN-211ENST00000513984 C11orf74Q86VG3 221 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 P3H2Q8IVL5 708 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 OR4K5Q8NGD3 323 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 OR51Q1Q8NH59 317 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 GPR151Q8TDV0 419 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 IPCEF1Q8WWN9 437 aaPredicted RBP13.91□□□□□ -0.18
VCAN-211ENST00000513984 RIT1Q92963 219 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 MUL1Q969V5 352 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 ISOC1Q96CN7 298 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 MVB12AQ96EY5 273 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 RBM18Q96H35 190 aaKnown RBP13.91□□□□□ -0.18
VCAN-211ENST00000513984 SLC41A2Q96JW4 573 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 SIGLEC11Q96RL6 698 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 DOK1Q99704 481 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 ALOXE3Q9BYJ1 711 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 CUTCQ9NTM9 273 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 PLCXD1Q9NUJ7 323 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 ZNF226Q9NYT6 803 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 SUSD2Q9UGT4 822 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 NDOR1Q9UHB4 597 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 PILRBQ9UKJ0 227 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 CENPVL1A0A0U1RR11 272 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 TMEM150CB9EJG8 249 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 BRINP1O60477 761 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 CDC123O75794 336 aaPredicted RBP13.9□□□□□ -0.18
VCAN-211ENST00000513984 OR2B3O76000 313 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 GUSBP08236 651 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 MSL3P1P0C860 447 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 GABRA3P34903 492 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 STT3AP46977 705 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 SEPHS1P49903 392 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 CDC42P60953 191 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 BTG2P78543 158 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 TARDBPQ13148 414 aaKnown RBP eCLIP13.9□□□□□ -0.18
VCAN-211ENST00000513984 GPR68Q15743 365 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 AMZ1Q400G9 498 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 C1orf94Q6P1W5 598 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 WDR74Q6RFH5 385 aaPredicted RBP13.9□□□□□ -0.18
VCAN-211ENST00000513984 MED25Q71SY5 747 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 KMT5CQ86Y97 462 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 CCDC103Q8IW40 242 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 METTL27Q8N6F8 245 aaPredicted RBP13.9□□□□□ -0.18
VCAN-211ENST00000513984 ZNF540Q8NDQ6 660 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 GAB3Q8WWW8 586 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 ZNF578Q96N58 590 aaPredicted RBP13.9□□□□□ -0.18
VCAN-211ENST00000513984 DGAT2Q96PD7 388 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 LHPPQ9H008 270 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 FOLH1BQ9HBA9 442 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 TMEM9Q9P0T7 183 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 ERVK-18Q9QC07 812 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 CDC14AQ9UNH5 594 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 AP3D1O14617 1153 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 TECTAO75443 2155 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 CYP7B1O75881 506 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 TP53P04637 393 aaPredicted RBP13.9□□□□□ -0.18
VCAN-211ENST00000513984 CCNYL3P0C7X3 344 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 NID1P14543 1247 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 MMP11P24347 488 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 GALNSP34059 522 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 TRHRP34981 398 aaPredicted RBP13.9□□□□□ -0.18
VCAN-211ENST00000513984 PEX19P40855 299 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 ARL4DP49703 201 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 EMDP50402 254 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 PSG6Q00889 435 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 ALDH6A1Q02252 535 aaKnown RBP13.9□□□□□ -0.18
VCAN-211ENST00000513984 ST3GAL3Q11203 375 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 COX10Q12887 443 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 LSAMPQ13449 338 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 ERV3-1Q14264 604 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 TRAM2Q15035 370 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 ZER1Q7Z7L7 766 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 NLGN4XQ8N0W4 816 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 GALNT15Q8N3T1 639 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 Q8N9G6 341 aaPredicted RBP13.9□□□□□ -0.18
VCAN-211ENST00000513984 SLC38A4Q969I6 547 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 PELOQ9BRX2 385 aaKnown RBP13.9□□□□□ -0.18
VCAN-211ENST00000513984 DUSP23Q9BVJ7 150 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 POLR2J3Q9H1A7 115 aaKnown RBP13.9□□□□□ -0.18
VCAN-211ENST00000513984 CTPS2Q9NRF8 586 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 SEMA4GQ9NTN9 838 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 FBXO34Q9NWN3 711 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 IMPAD1Q9NX62 359 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 PCDHGA10Q9Y5H3 936 aa13.9□□□□□ -0.18
VCAN-211ENST00000513984 HEMK1Q9Y5R4 338 aaPredicted RBP13.9□□□□□ -0.18
VCAN-211ENST00000513984 A0A1B0GTQ1 180 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 GXYLT2A0PJZ3 443 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 CPSF4LA6NMK7 179 aaKnown RBP13.89□□□□□ -0.19
VCAN-211ENST00000513984 RGS10O43665 173 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 MPZL2O60487 215 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 OR5F1O95221 314 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 MYF5P13349 255 aa13.89□□□□□ -0.19
VCAN-211ENST00000513984 PNLIPP16233 465 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms