RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 NDOR1Q9UHB4 597 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 SLC13A4Q9UKG4 626 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 SLC6A14Q9UN76 642 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 SRPK3Q9UPE1 567 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 ZNF443Q9Y2A4 671 aaPredicted RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 TPRKBQ9Y3C4 175 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 TMEM184BQ9Y519 407 aaPredicted RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 PCDHGA6Q9Y5G7 932 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 PCDHGA10Q9Y5H3 936 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 HEMK1Q9Y5R4 338 aaPredicted RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 SETXQ7Z333 2677 aaKnown RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 TRBV4-1A0A0J9YWV2 114 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 A0A1B0GX78 115 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 TMEM221A6NGB7 291 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 ZAR1LA6NP61 321 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 TMEM150CB9EJG8 249 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 M0R296 226 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 M0R3H8 397 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 SIGLEC6O43699 453 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 MPZL2O60487 215 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 CYP7B1O75881 506 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 CER1O95813 267 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 GASTP01350 101 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 ZNF883P0CG24 379 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 OSMP13725 252 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 NID1P14543 1247 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 FOLR1P15328 257 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 GABRB1P18505 474 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 GSTM3P21266 225 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 RORAP35398 523 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 IFNGR2P38484 337 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 CRISP1P54107 249 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 UGT2B15P54855 530 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 PSMD4P55036 377 aaKnown RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 MAT1AQ00266 395 aaKnown RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 PSG6Q00889 435 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 IL5RAQ01344 420 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 ST3GAL3Q11203 375 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 SRSF5Q13243 272 aaKnown RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 TUBA3CQ13748 450 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 GANABQ14697 944 aaKnown RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 EXOSC7Q15024 291 aaKnown RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 TRAM2Q15035 370 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 SEC23BQ15437 767 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 ZNHIT3Q15649 155 aaPredicted RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 DECR1Q16698 335 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 ENTPD8Q5MY95 495 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 PGBD2Q6P3X8 592 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 KLHL17Q6TDP4 642 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 DEF8Q6ZN54 512 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 ZNF574Q6ZN55 896 aaPredicted RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 ZNF836Q6ZNA1 936 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 BPHLQ86WA6 291 aaPredicted RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 VRK2Q86Y07 508 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 CCDC71Q8IV32 467 aaPredicted RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 SHISA5Q8N114 240 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 ZNF615Q8N8J6 731 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 TMEM105Q8N8V8 129 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 AQP11Q8NBQ7 271 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 ZBTB44Q8NCP5 570 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 MORN4Q8NDC4 146 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 PLPP5Q8NEB5 264 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 OR9Q2Q8NGE9 314 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 OR52J3Q8NH60 311 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 RHOXF1Q8NHV9 184 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 VANGL1Q8TAA9 524 aaPredicted RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 SLC7A13Q8TCU3 470 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 TRUB1Q8WWH5 349 aaKnown RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 IPCEF1Q8WWN9 437 aaPredicted RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 DIO2Q92813 273 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 SLC38A4Q969I6 547 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 ZG16BQ96DA0 208 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 OTUB1Q96FW1 271 aaPredicted RBP7.78□□□□□ -1.16
RNF4-220ENST00000513578 NIPSNAP1Q9BPW8 284 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 NDC1Q9BTX1 674 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 UCK2Q9BZX2 261 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 TGIF2Q9GZN2 237 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 CXorf56Q9H5V9 222 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 ARMC7Q9H6L4 198 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 GAREM1Q9H706 876 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 ZNF304Q9HCX3 659 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 CCNB1IP1Q9NPC3 277 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 NECTIN3Q9NQS3 549 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 IRAK4Q9NWZ3 460 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 SCN3BQ9NY72 215 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 TMEM9Q9P0T7 183 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 REV1Q9UBZ9 1251 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 FTSJ1Q9UET6 329 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 PRODH2Q9UF12 536 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 CFL2Q9Y281 166 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 CEPT1Q9Y6K0 416 aa7.78□□□□□ -1.16
RNF4-220ENST00000513578 SEC16AO15027 2179 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 IGLV3-12A0A075B6K2 115 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 A0A1W2PQM1 296 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 CDHR4A6H8M9 788 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 NPIPB9F8W1W9 429 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 ARHGAP33O14559 1287 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 AP3D1O14617 1153 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 HYAL3O43820 417 aaPredicted RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 TPST2O60704 377 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms