RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 EIF2AK1Q9BQI3 630 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 TMEM47Q9BQJ4 181 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 C11orf70Q9BRQ4 267 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 WDR83Q9BRX9 315 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 MARVELD1Q9BSK0 173 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 SF3B5Q9BWJ5 86 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 BBS2Q9BXC9 721 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 GPR63Q9BZJ6 419 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ZYG11BQ9C0D3 744 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ACTR6Q9GZN1 396 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 MED28Q9H204 178 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 SAV1Q9H4B6 383 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 KLHL31Q9H511 634 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 MROH8Q9H579 483 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 NMUR1Q9HB89 426 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 MCCC2Q9HCC0 563 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 IL1RAPQ9NPH3 570 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 PLSCR3Q9NRY6 295 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 RXFP3Q9NSD7 469 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CMTM6Q9NX76 183 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 NDUFAF4Q9P032 175 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 NUFIP1Q9UHK0 495 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 LEF1Q9UJU2 399 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 PURGQ9UJV8 347 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 TINAGQ9UJW2 476 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 AGO1Q9UL18 857 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 MAGED2Q9UNF1 606 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CNTN6Q9UQ52 1028 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 MGAT4BQ9UQ53 548 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 BTRCQ9Y297 605 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ACOT9Q9Y305 439 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 INSL5Q9Y5Q6 135 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CFAP54Q96N23 3096 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 PTPRFP10586 1907 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 PTPRZ1P23471 2315 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 MYH9P35579 1960 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 LRRC37AA6NMS7 1700 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CACNA1BQ00975 2339 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CDK5RAP2Q96SN8 1893 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 A0A1W2PP18 115 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 A0A1W2PRQ8 180 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 ANKDD1BA6NHY2 528 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 A8MXK9 166 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 C19orf81C9J6K1 198 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 H3BQ06 376 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 K7ENM7 598 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 M0QZQ0 153 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 AIPO00170 330 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 NME4O00746 187 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SDHDO14521 159 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 PSMD3O43242 534 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SGCEO43556 437 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 TSPAN6O43657 245 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 TPST1O60507 370 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 EIF1BO60739 113 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 MITFO75030 526 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 NIPSNAP2O75323 286 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 ENTPD3O75355 529 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 BANF1O75531 89 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 PGLSO95336 258 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 HTR1AP08908 422 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 ZDHHC11BP0C7U3 371 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SPNP16150 400 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 KCNA5P22460 613 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 ITGB8P26012 769 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 GTF2E2P29084 291 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 HOXA6P31267 233 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SDC2P34741 201 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 EIF1P41567 113 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 GRIA1P42261 906 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 MTHFRP42898 656 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 BRCC3P46736 316 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CAPZA2P47755 286 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 NOVP48745 357 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 TGM4P49221 684 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CLDN20P56880 219 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 RAB5BP61020 215 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 PPP3R1P63098 170 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 ERVK-8P63133 956 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 TFAMQ00059 246 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CSTF1Q05048 431 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 PRKG2Q13237 762 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SLAMF1Q13291 335 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 PEX6Q13608 980 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 NCF4Q15080 339 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SF3A2Q15428 464 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SNRNP35Q16560 246 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 IMPG1Q17R60 797 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 KCTD19Q17RG1 926 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 INO80DQ53TQ3 878 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 PABPC1L2AQ5JQF8 200 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 DNLZQ5SXM8 178 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 OTUD3Q5T2D3 398 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 ASPHD1Q5U4P2 390 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CES4AQ5XG92 561 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 RAP1GAP2Q684P5 730 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 GLYATQ6IB77 296 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 TCEAL6Q6IPX3 200 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms