RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 LSM11P83369 360 aaKnown RBP eCLIP16.66■□□□□ 0.26
NUP54-205ENST00000507257 TMEM115Q12893 351 aaPredicted RBP16.66■□□□□ 0.26
NUP54-205ENST00000507257 RPA4Q13156 261 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 FGFBP1Q14512 234 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 TRAM2Q15035 370 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 GSG1Q2KHT4 349 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 KHDRBS2Q5VWX1 349 aaKnown RBP16.66■□□□□ 0.26
NUP54-205ENST00000507257 BTN2A1Q7KYR7 527 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 GPR135Q8IZ08 494 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 UXS1Q8NBZ7 420 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 OR51I1Q9H343 314 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 MED9Q9NWA0 146 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 ZNF624Q9P2J8 865 aaPredicted RBP16.66■□□□□ 0.26
NUP54-205ENST00000507257 TRAV6A0A075B6T7 132 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 CIB4A0PJX0 185 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 SLC9A3R1O14745 358 aaPredicted RBP16.65■□□□□ 0.26
NUP54-205ENST00000507257 GRM6O15303 877 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 C4BPBP20851 252 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 ETV3P41162 512 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 OMPP47874 163 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 KHKP50053 298 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 MMP15P51511 669 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 CCL23P55773 120 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 HSPB3Q12988 150 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 INSL4Q14641 139 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 ZNF791Q3KP31 576 aaPredicted RBP16.65■□□□□ 0.26
NUP54-205ENST00000507257 TMEM220Q6QAJ8 160 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 SEZ6L2Q6UXD5 910 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 TECPR1Q7Z6L1 1165 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 KLBQ86Z14 1044 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 RBPMSQ93062 196 aaKnown RBP16.65■□□□□ 0.26
NUP54-205ENST00000507257 DPCDQ9BVM2 203 aaPredicted RBP16.65■□□□□ 0.26
NUP54-205ENST00000507257 SORBS1Q9BX66 1292 aaKnown RBP16.65■□□□□ 0.26
NUP54-205ENST00000507257 MS4A8Q9BY19 250 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 EVA1BQ9NVM1 165 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 ZNF224Q9NZL3 707 aa16.65■□□□□ 0.26
NUP54-205ENST00000507257 ZFR2Q9UPR6 939 aaKnown RBP16.65■□□□□ 0.26
NUP54-205ENST00000507257 A0A0G2JPF8 293 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 HNRNPCL2B2RXH8 293 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 HNRNPCL3B7ZW38 293 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 TSPAN9O75954 239 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 UBL3O95164 117 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 TBX6O95947 436 aaPredicted RBP16.64■□□□□ 0.26
NUP54-205ENST00000507257 HMGN1P05114 100 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 HOXD4P09016 255 aaPredicted RBP16.64■□□□□ 0.26
NUP54-205ENST00000507257 HNRNPCL4P0DMR1 293 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 ZNF81P51508 661 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 GBX2P52951 348 aaPredicted RBP16.64■□□□□ 0.26
NUP54-205ENST00000507257 PITPNAQ00169 270 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 LRRC73Q5JTD7 316 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 CDC73Q6P1J9 531 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 SFXN4Q6P4A7 337 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 BAIAP2L2Q6UXY1 529 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 SAMD12Q8N8I0 201 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 OR4Q3Q8NH05 313 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 OR56B4Q8NH76 319 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 PIGXQ8TBF5 258 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 YIPF5Q969M3 257 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 ABHD1Q96SE0 405 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 TMEM168Q9H0V1 697 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 C12orf4Q9NQ89 552 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 BABAM2Q9NXR7 383 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 RABL2AQ9UBK7 228 aaPredicted RBP16.64■□□□□ 0.26
NUP54-205ENST00000507257 ADAM29Q9UKF5 820 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 RABL2BQ9UNT1 228 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 CSNK1G3Q9Y6M4 447 aa16.64■□□□□ 0.26
NUP54-205ENST00000507257 BNIP3LO60238 219 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 ITGA10O75578 1167 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 ZP3P21754 424 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 TRIM23P36406 574 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 ARFIP1P53367 373 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 MEF2AQ02078 507 aaPredicted RBP16.64■□□□□ 0.25
NUP54-205ENST00000507257 DYRK1AQ13627 763 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 ZNF267Q14586 743 aaPredicted RBP16.64■□□□□ 0.25
NUP54-205ENST00000507257 PGGHGQ32M88 737 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 PRAMEF14Q5SWL7 426 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 PRAMEF13Q5VWM6 474 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 SLC22A10Q63ZE4 541 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 TMEM64Q6YI46 380 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 PLEKHM3Q6ZWE6 761 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 GID4Q8IVV7 300 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 TEX19Q8NA77 164 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 CHST14Q8NCH0 376 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 ZNF740Q8NDX6 193 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 MRPS31Q92665 395 aaKnown RBP16.64■□□□□ 0.25
NUP54-205ENST00000507257 WBP1Q96G27 269 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 ERMAPQ96PL5 475 aaPredicted RBP16.64■□□□□ 0.25
NUP54-205ENST00000507257 ARHGDIGQ99819 225 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 CACNG6Q9BXT2 260 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 THSD7BQ9C0I4 1608 aa16.64■□□□□ 0.25
NUP54-205ENST00000507257 A0A0G2JK05 382 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 KLF4O43474 513 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 HYAL3O43820 417 aaPredicted RBP16.63■□□□□ 0.25
NUP54-205ENST00000507257 H2AFB2P0C5Z0 115 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 DRD2P14416 443 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 IL32P24001 234 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 TRA2BP62995 288 aaKnown RBP16.63■□□□□ 0.25
NUP54-205ENST00000507257 SLC7A9P82251 487 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 DHODHQ02127 395 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 ST3GAL3Q11203 375 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms