RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 IFT27Q9BW83 186 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SAP130Q9H0E3 1048 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SLC6A17Q9H1V8 727 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SLC39A1Q9NY26 324 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SEC14L3Q9UDX4 400 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 ING1Q9UK53 422 aaPredicted RBP14.94□□□□□ -0.02
SCLT1-208ENST00000506368 TMEM5Q9Y2B1 443 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SLC22A23A1A5C7 686 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 LRRN3E7EW58 273 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 L7N2F9 121 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 PRRG1O14668 218 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SERPIND1P05546 499 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 TFPIP10646 304 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 ATP1B2P14415 290 aaPredicted RBP14.94□□□□□ -0.02
SCLT1-208ENST00000506368 THBS2P35442 1172 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 CD96P40200 585 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 RAP2BP61225 183 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 CRYZQ08257 329 aaKnown RBP14.94□□□□□ -0.02
SCLT1-208ENST00000506368 DUSP4Q13115 394 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SF1Q15637 639 aaKnown RBP14.94□□□□□ -0.02
SCLT1-208ENST00000506368 MPEG1Q2M385 716 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 CTXN3Q4LDR2 81 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 TCTE1Q5JU00 501 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SFXN4Q6P4A7 337 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 NLRC3Q7RTR2 1065 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 COMMD6Q7Z4G1 85 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 FAM98AQ8NCA5 519 aaKnown RBP14.94□□□□□ -0.02
SCLT1-208ENST00000506368 GPR26Q8NDV2 337 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 BVESQ8NE79 360 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 OR5AK3PQ8NH89 298 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 DACT3Q96B18 629 aaPredicted RBP14.94□□□□□ -0.02
SCLT1-208ENST00000506368 PRRC1Q96M27 445 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 CAMK1GQ96NX5 476 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 LRRN3Q9H3W5 708 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 BRD9Q9H8M2 597 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SCPEP1Q9HB40 452 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 ABRACLQ9P1F3 81 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 PLXNB3Q9ULL4 1909 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 A0A1B0GUH1 482 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 PLSCR5A0PG75 271 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 CD8B2A6NJW9 211 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 MPTX1A8MV57 137 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ARHGEF33A8MVX0 844 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 G3V3Q6 166 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 FZD7O75084 574 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 SLCO2B1O94956 709 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 LATS1O95835 1130 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 CATP04040 527 aaKnown RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 PROS1P07225 676 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 NMBP08949 121 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 OR12D1P0DN82 309 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 SAGP10523 405 aaPredicted RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 CD8BP10966 210 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 HTR1FP30939 366 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 RPL6Q02878 288 aaKnown RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 STK11Q15831 433 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ZNF322Q6U7Q0 402 aaPredicted RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 EID2Q8N6I1 236 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ATAD1Q8NBU5 361 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 MORN4Q8NDC4 146 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ASIC4Q96FT7 647 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 STOX2Q9P2F5 926 aaPredicted RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 PPIEQ9UNP9 301 aaKnown RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 FCF1Q9Y324 198 aaKnown RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 LTBP2Q14767 1821 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ZNF593O00488 134 aaPredicted RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ECDO95905 644 aaPredicted RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 SERPINA4P29622 427 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 HOXA1P49639 335 aaPredicted RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 VSX2P58304 361 aaPredicted RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 TSPAN31Q12999 210 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 SNTB2Q13425 540 aaKnown RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ATXN7L2Q5T6C5 722 aaPredicted RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 AADACL4Q5VUY2 407 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 HIST2H2AA3Q6FI13 130 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ADNP2Q6IQ32 1131 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 DEFB128Q7Z7B8 93 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 LHFPL3Q86UP9 236 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 SIAH3Q8IW03 269 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 TBC1D19Q8N5T2 526 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ZFP41Q8N8Y5 198 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 TEX19Q8NA77 164 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 SPRYD4Q8WW59 207 aaPredicted RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 VWCEQ96DN2 955 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ABHD1Q96SE0 405 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 FAM83CQ9BQN1 747 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ZNF649Q9BS31 505 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ANKRD19PQ9H560 264 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 METTL17Q9H7H0 456 aaPredicted RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 PRM3Q9NNZ6 103 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 WASH6PQ9NQA3 447 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 MIEF1Q9NQG6 463 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 RPS6KB2Q9UBS0 482 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 PADI3Q9ULW8 664 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 ZFR2Q9UPR6 939 aaKnown RBP14.93□□□□□ -0.02
SCLT1-208ENST00000506368 PPIL1Q9Y3C6 166 aa14.93□□□□□ -0.02
SCLT1-208ENST00000506368 PDE4DIPQ5VU43 2346 aa14.92□□□□□ -0.02
SCLT1-208ENST00000506368 A8MX80 341 aa14.92□□□□□ -0.02
SCLT1-208ENST00000506368 AGRPO00253 132 aa14.92□□□□□ -0.02
SCLT1-208ENST00000506368 KPNA3O00505 521 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms