RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 EXOSC1Q9Y3B2 195 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 KIAA1210Q9ULL0 1709 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 OR52A4PA6NMU1 304 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PMS2P5A8MQ11 134 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 TMEM110-MUSTN1A8MSY1 372 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 FAM72CH0Y354 149 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 K7EQD1 137 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 TRAFD1O14545 582 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF264O43296 627 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 OAS1P00973 400 aaKnown RBP3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 UQCRFS1P1P0C7P4 283 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 BCKDHAP12694 445 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PLA2G2AP14555 144 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 MT3P25713 68 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 MAGEA5P43359 124 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 NDST2P52849 883 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 AP3M2P53677 418 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PRRX1P54821 245 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 NANOS2P60321 138 aaKnown RBP3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 SNRPD1P62314 119 aaKnown RBP3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 GSTO1P78417 241 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PLD1Q13393 1074 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 KIAA0141Q14154 515 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 MTF1Q14872 753 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZRSR1Q15695 479 aaKnown RBP3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 UBE2V2Q15819 145 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 FAM189A2Q15884 450 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF672Q499Z4 452 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 HSP90AB3PQ58FF7 597 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 ARMC12Q5T9G4 340 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 FAM72AQ5TYM5 149 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PRAMEF5Q5TYX0 476 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PRAMEF6Q5VXH4 476 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 FAM72DQ6L9T8 149 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PRR5LQ6MZQ0 368 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PNCKQ6P2M8 343 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 LCLAT1Q6UWP7 414 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 HACD2Q6Y1H2 254 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 LANCL3Q6ZV70 420 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 KIAA1328Q86T90 577 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 FAM72BQ86X60 149 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 SLC38A6Q8IZM9 456 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 OR9K2Q8NGE7 335 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 FAM3CQ92520 227 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 SDSLQ96GA7 329 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 TCEANC2Q96MN5 208 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 AGAP4Q96P64 663 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 RBM14Q96PK6 669 aaKnown RBP3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 CABLES2Q9BTV7 478 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 RPP25Q9BUL9 199 aaKnown RBP3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 CLEC7AQ9BXN2 247 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 TRIM9Q9C026 710 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 SP140LQ9H930 580 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 WDR41Q9HAD4 459 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 IL1RL2Q9HB29 575 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 SPATA7Q9P0W8 599 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PCSK1NQ9UHG2 260 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PIGLQ9Y2B2 252 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 PNPLA6Q8IY17 1366 aa3.28□□□□□ -1.88
TRAPPC13-208ENST00000505553 A0A075B6Q4 140 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 ESYT2A0FGR8 921 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 BCLAF3A2AJT9 711 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 FAM74A7A6NL05 159 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 H0YIV9 168 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 K7ERI5 159 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 TM9SF1O15321 606 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 B3GAT3O94766 335 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 SORBS2O94875 1100 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 IGF1P05019 195 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CD48P09326 243 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 HOXB7P09629 217 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 ADORA3P0DMS8 318 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CCDC130P13994 396 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 FOSL2P15408 326 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CD1DP15813 335 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 AOC1P19801 751 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 PGCP20142 388 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 TPSB2P20231 275 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 UCP1P25874 307 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 LAP3P28838 519 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 PDHA2P29803 388 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CHRNB4P30926 498 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 EPS15P42566 896 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 STK19P49842 368 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 ERVFC1-1P60608 527 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 RPS8P62241 208 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 BDH1Q02338 343 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 ZNF177Q13360 481 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 ELAVL3Q14576 367 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 RAB35Q15286 201 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 TPSAB1Q15661 275 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 CD226Q15762 336 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 UPP1Q16831 310 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 KNOP1Q1ED39 458 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 SNAI3Q3KNW1 292 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 FAM74A3Q4VXF1 159 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 DCST2Q5T1A1 773 aa3.27□□□□□ -1.89
TRAPPC13-208ENST00000505553 PRAMEF20Q5VT98 475 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms