RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 DUX4L9Q6RFH8 374 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 VHLLQ6RSH7 139 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 B3GNT6Q6ZMB0 384 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ARHGAP36Q6ZRI8 547 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 RSRC2Q7L4I2 434 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF572Q7Z3I7 529 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 LRP10Q7Z4F1 713 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 KCTD20Q7Z5Y7 419 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM160B2Q86V87 743 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 RPS19BP1Q86WX3 136 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 GALNT13Q8IUC8 556 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 MISPQ8IVT2 679 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 B3GNT7Q8NFL0 401 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 LINS1Q8NG48 757 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 OR51T1Q8NGJ9 327 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 OR1P1Q8NH06 330 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 OR4C6Q8NH72 309 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 OR9G1Q8NH87 305 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SCARB1Q8WTV0 552 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ST8SIA2Q92186 375 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ELMO1Q92556 727 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TNFRSF14Q92956 283 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 NCLNQ969V3 563 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 C2orf48Q96LS8 159 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 AK8Q96MA6 479 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SFXN2Q96NB2 322 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 LRFN5Q96NI6 719 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 NT5C1BQ96P26 610 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TM9SF2Q99805 663 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 BCL7BQ9BQE9 202 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 MIEN1Q9BRT3 115 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ULBP3Q9BZM4 244 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 COMMD5Q9GZQ3 224 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TWSG1Q9GZX9 223 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CCDC8Q9H0W5 538 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 MFSD1Q9H3U5 465 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 EPB41L4AQ9HCS5 686 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 TMEM140Q9NV12 185 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 WNT16Q9UBV4 365 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DUX4Q9UBX2 424 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF70Q9UC06 446 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 KLQ9UEF7 1012 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CD207Q9UJ71 328 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 RIMS3Q9UJD0 308 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PCDHB1Q9Y5F3 818 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TIMM9Q9Y5J7 89 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 V9GYY5 206 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 FN1P02751 2386 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 FANCMQ8IYD8 2048 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 HIVEP1P15822 2718 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CARMIL3Q8ND23 1372 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TRAV3A0A0B4J244 114 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CENPVL3A0A0U1RRI6 287 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 XKRY2A2RUG3 117 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CCDC160A6NGH7 325 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 A6NNZ2 444 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TMEM189-UBE2V1I3L0A0 370 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 XKRYO14609 159 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 HGSO14964 777 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 SMAD9O15198 467 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 NCAM2O15394 837 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PRICKLE3O43900 615 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 TBX19O60806 448 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ADAM11O75078 769 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FRAT2O75474 233 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 IL1BP01584 269 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ITGB2P05107 769 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 GPX1P07203 203 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM153BP0C7A2 387 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DEFA4P12838 97 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 GNB3P16520 340 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 MALP21145 153 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ACHEP22303 614 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PTGS1P23219 599 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 RPL13P26373 211 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 HTR1DP28221 377 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 AXLP30530 894 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 UQCRC1P31930 480 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ADMP35318 185 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CD200P41217 278 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 NR4A2P43354 598 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PGDP52209 483 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 KLF3P57682 345 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 IRF9Q00978 393 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 UBE2V1Q13404 147 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 KRR1Q13601 381 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 TUBA3CQ13748 450 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 GPNMBQ14956 572 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZKSCAN8Q15776 578 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 NDUFA5Q16718 116 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ABCA11PQ4W5N1 156 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF667Q5HYK9 610 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 STEAP3Q658P3 488 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF470Q6ECI4 717 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 KIAA0930Q6ICG6 404 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 CXorf57Q6NSI4 855 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 TUBA3EQ6PEY2 450 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 BTNL9Q6UXG8 535 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 LIPIQ6XZB0 460 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CDHR3Q6ZTQ4 885 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms