RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 GPATCH1Q9BRR8 931 aaKnown RBP16.89■□□□□ 0.29
TSSC4-210ENST00000496468 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.89■□□□□ 0.29
TSSC4-210ENST00000496468 KAT8Q9H7Z6 458 aaKnown RBP16.89■□□□□ 0.29
TSSC4-210ENST00000496468 L3MBTL1Q9Y468 752 aa16.89■□□□□ 0.29
TSSC4-210ENST00000496468 TP53I11O14683 189 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 TSPAN2O60636 221 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 UGT2B11O75310 529 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 TNFRSF21O75509 655 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 IGKV1D-16P01601 117 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 BCHEP06276 602 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 NR2F1P10589 423 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 CD96P40200 585 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 PSME3P61289 254 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 RPP38P78345 283 aaKnown RBP16.88■□□□□ 0.29
TSSC4-210ENST00000496468 ARHGAP11BQ3KRB8 267 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 GPAT3Q53EU6 434 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 HEPHL1Q6MZM0 1159 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 IGFL3Q6UXB1 125 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 ASB18Q6ZVZ8 466 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 PGAM4Q8N0Y7 254 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 C10orf111Q8N326 155 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 GOLM1Q8NBJ4 401 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 FBXO27Q8NI29 283 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 HAS2Q92819 552 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 TMEM125Q96AQ2 219 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 SGCZQ96LD1 299 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 SPATA9Q9BWV2 254 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 ZNF350Q9GZX5 532 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 TRIM45Q9H8W5 580 aaPredicted RBP16.88■□□□□ 0.29
TSSC4-210ENST00000496468 A4GALTQ9NPC4 353 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 SPAG4Q9NPE6 437 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.88■□□□□ 0.29
TSSC4-210ENST00000496468 LIPT1Q9Y234 373 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 AP3M1Q9Y2T2 418 aa16.88■□□□□ 0.29
TSSC4-210ENST00000496468 B2RBV5 119 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 K7EM74 188 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 SLC28A2O43868 658 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 DPM1O60762 260 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 STX11O75558 287 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 SLC25A12O75746 678 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 NUDT7P0C024 238 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 T-ENOLP0DO92 83 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 ARAFP10398 606 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 CYP4B1P13584 511 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 PNLIPRP2P54317 469 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 SLC25A3Q00325 362 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 GNA13Q14344 377 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 C6orf89Q6UWU4 347 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 SERPINA11Q86U17 422 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 RBM15BQ8NDT2 890 aaKnown RBP16.87■□□□□ 0.29
TSSC4-210ENST00000496468 MDS2Q8NDY4 140 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 OR10A6Q8NH74 314 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 FAM110BQ8TC76 370 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 MAL2Q969L2 176 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 C5orf34Q96MH7 638 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 SIGLEC12Q96PQ1 595 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 TRNT1Q96Q11 434 aaKnown RBP16.87■□□□□ 0.29
TSSC4-210ENST00000496468 ECSITQ9BQ95 431 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 TIMMDC1Q9NPL8 285 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 CSAG2Q9Y5P2 127 aa16.87■□□□□ 0.29
TSSC4-210ENST00000496468 C5orf58C9J3I9 102 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 KIAA0513O60268 411 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 ICOSLGO75144 302 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 NEURL1O76050 574 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 H6PDO95479 791 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 LCN1P31025 176 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 CD97P48960 835 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 TNFSF10P50591 281 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 CRISP3P54108 245 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 GABPB1Q06547 395 aaPredicted RBP16.86■□□□□ 0.29
TSSC4-210ENST00000496468 SYPL1Q16563 259 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 FLYWCH1Q4VC44 716 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 NUP54Q7Z3B4 507 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 NET1Q7Z628 596 aaPredicted RBP16.86■□□□□ 0.29
TSSC4-210ENST00000496468 ZAR1Q86SH2 424 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 ANKFN1Q8N957 763 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 C11orf65Q8NCR3 313 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 PSD4Q8NDX1 1056 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 HGDQ93099 445 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 TMCO6Q96DC7 493 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 TMEM19Q96HH6 336 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 SDF2Q99470 211 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 TMEM38AQ9H6F2 299 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 ZNF71Q9NQZ8 489 aaPredicted RBP16.86■□□□□ 0.29
TSSC4-210ENST00000496468 POLE3Q9NRF9 147 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 CMTM6Q9NX76 183 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 CALML5Q9NZT1 146 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 ABCD2Q9UBJ2 740 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 WDR45Q9Y484 360 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 CHCHD2Q9Y6H1 151 aaPredicted RBP16.86■□□□□ 0.29
TSSC4-210ENST00000496468 ATMQ13315 3056 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 CACNA1GO43497 2377 aa16.86■□□□□ 0.29
TSSC4-210ENST00000496468 TRAV17A0A0B4J275 112 aa16.85■□□□□ 0.29
TSSC4-210ENST00000496468 PRAMEF27A3QJZ7 478 aa16.85■□□□□ 0.29
TSSC4-210ENST00000496468 PRAMEF25A6NGN4 478 aa16.85■□□□□ 0.29
TSSC4-210ENST00000496468 FAM220BPB1ANY3 271 aa16.85■□□□□ 0.29
TSSC4-210ENST00000496468 NME4O00746 187 aa16.85■□□□□ 0.29
TSSC4-210ENST00000496468 UTS2O95399 124 aa16.85■□□□□ 0.29
TSSC4-210ENST00000496468 CHRM4P08173 479 aa16.85■□□□□ 0.29
TSSC4-210ENST00000496468 CCL3P10147 92 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms