RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SPOPO43791 374 aa3□□□□□ -1.93
CLK1-214ENST00000496205 ECI2O75521 394 aa3□□□□□ -1.93
CLK1-214ENST00000496205 SEMA4FO95754 770 aa3□□□□□ -1.93
CLK1-214ENST00000496205 IGHG1P01857 330 aa3□□□□□ -1.93
CLK1-214ENST00000496205 UGT2B4P06133 528 aa3□□□□□ -1.93
CLK1-214ENST00000496205 ZNF735P0CB33 412 aa3□□□□□ -1.93
CLK1-214ENST00000496205 MBL2P11226 248 aaPredicted RBP3□□□□□ -1.93
CLK1-214ENST00000496205 ACADVLP49748 655 aa3□□□□□ -1.93
CLK1-214ENST00000496205 PRELPP51888 382 aa3□□□□□ -1.93
CLK1-214ENST00000496205 AIF1P55008 147 aa3□□□□□ -1.93
CLK1-214ENST00000496205 RAG2P55895 527 aa3□□□□□ -1.93
CLK1-214ENST00000496205 RPS8P62241 208 aaKnown RBP3□□□□□ -1.93
CLK1-214ENST00000496205 ENPP2Q13822 863 aa3□□□□□ -1.93
CLK1-214ENST00000496205 EXOC3L2Q2M3D2 409 aa3□□□□□ -1.93
CLK1-214ENST00000496205 ADPRMQ3LIE5 342 aa3□□□□□ -1.93
CLK1-214ENST00000496205 DCAF4L1Q3SXM0 396 aa3□□□□□ -1.93
CLK1-214ENST00000496205 USH1GQ495M9 461 aa3□□□□□ -1.93
CLK1-214ENST00000496205 SPINK14Q6IE38 97 aa3□□□□□ -1.93
CLK1-214ENST00000496205 ASRGL1Q7L266 308 aa3□□□□□ -1.93
CLK1-214ENST00000496205 NBPF5PQ86XG9 351 aaPredicted RBP3□□□□□ -1.93
CLK1-214ENST00000496205 SLC22A9Q8IVM8 553 aa3□□□□□ -1.93
CLK1-214ENST00000496205 TTC5Q8N0Z6 440 aa3□□□□□ -1.93
CLK1-214ENST00000496205 Q8N377 158 aa3□□□□□ -1.93
CLK1-214ENST00000496205 ARFGAP2Q8N6H7 521 aa3□□□□□ -1.93
CLK1-214ENST00000496205 ZNF781Q8N8C0 355 aa3□□□□□ -1.93
CLK1-214ENST00000496205 NECAB1Q8N987 351 aa3□□□□□ -1.93
CLK1-214ENST00000496205 SUMF1Q8NBK3 374 aa3□□□□□ -1.93
CLK1-214ENST00000496205 AKR7LQ8NHP1 331 aa3□□□□□ -1.93
CLK1-214ENST00000496205 TRMT10AQ8TBZ6 339 aaKnown RBP3□□□□□ -1.93
CLK1-214ENST00000496205 AGR3Q8TD06 166 aa3□□□□□ -1.93
CLK1-214ENST00000496205 ANKRD49Q8WVL7 239 aa3□□□□□ -1.93
CLK1-214ENST00000496205 NT5C3BQ969T7 300 aa3□□□□□ -1.93
CLK1-214ENST00000496205 NTNG2Q96CW9 530 aa3□□□□□ -1.93
CLK1-214ENST00000496205 NDUFAF3Q9BU61 184 aa3□□□□□ -1.93
CLK1-214ENST00000496205 ST6GALNAC5Q9BVH7 336 aa3□□□□□ -1.93
CLK1-214ENST00000496205 PNNQ9H307 717 aaKnown RBP3□□□□□ -1.93
CLK1-214ENST00000496205 FAM124BQ9H5Z6 455 aaPredicted RBP3□□□□□ -1.93
CLK1-214ENST00000496205 EXO5Q9H790 373 aa3□□□□□ -1.93
CLK1-214ENST00000496205 YY1AP1Q9H869 796 aa3□□□□□ -1.93
CLK1-214ENST00000496205 FN3KRPQ9HA64 309 aa3□□□□□ -1.93
CLK1-214ENST00000496205 Q9HAA7 133 aa3□□□□□ -1.93
CLK1-214ENST00000496205 IL1RL2Q9HB29 575 aa3□□□□□ -1.93
CLK1-214ENST00000496205 ADGRL4Q9HBW9 690 aa3□□□□□ -1.93
CLK1-214ENST00000496205 POLD4Q9HCU8 107 aa3□□□□□ -1.93
CLK1-214ENST00000496205 HYPKQ9NX55 129 aa3□□□□□ -1.93
CLK1-214ENST00000496205 TAS2R16Q9NYV7 291 aa3□□□□□ -1.93
CLK1-214ENST00000496205 THYN1Q9P016 225 aa3□□□□□ -1.93
CLK1-214ENST00000496205 RNF14Q9UBS8 474 aa3□□□□□ -1.93
CLK1-214ENST00000496205 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3□□□□□ -1.93
CLK1-214ENST00000496205 FOXJ3Q9UPW0 622 aa3□□□□□ -1.93
CLK1-214ENST00000496205 FBXO7Q9Y3I1 522 aa3□□□□□ -1.93
CLK1-214ENST00000496205 SLCO1B1Q9Y6L6 691 aa3□□□□□ -1.93
CLK1-214ENST00000496205 PRSS21Q9Y6M0 314 aa3□□□□□ -1.93
CLK1-214ENST00000496205 WDR19Q8NEZ3 1342 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 CLSPNQ9HAW4 1339 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 IGHV3OR16-10A0A075B7F0 116 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 A0A0A6YYD4 124 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 ARPC4-TTLL3A0A0A6YYG9 625 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 MFSD2BA6NFX1 497 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 ERICH4A6NGS2 130 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 E9PMD0 336 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 SGK494L7N484 410 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 SNNO75324 88 aaPredicted RBP2.99□□□□□ -1.93
CLK1-214ENST00000496205 BBOX1O75936 387 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 STK17BO94768 372 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 SORBS2O94875 1100 aaKnown RBP2.99□□□□□ -1.93
CLK1-214ENST00000496205 OR4F21O95013 312 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 NDUFA7O95182 113 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 IL1BP01584 269 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 DBTP11182 482 aaKnown RBP2.99□□□□□ -1.93
CLK1-214ENST00000496205 ZNF44P15621 663 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 DPEP1P16444 411 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 PAICSP22234 425 aaKnown RBP2.99□□□□□ -1.93
CLK1-214ENST00000496205 PSMA2P25787 234 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 RPL9P32969 192 aaKnown RBP2.99□□□□□ -1.93
CLK1-214ENST00000496205 TAGLN2P37802 199 aaKnown RBP2.99□□□□□ -1.93
CLK1-214ENST00000496205 SLC1A6P48664 564 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 PPT1P50897 306 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 SUCLG1P53597 346 aaKnown RBP2.99□□□□□ -1.93
CLK1-214ENST00000496205 HAND2P61296 217 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 ARHGAP19Q14CB8 494 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 DPYSL2Q16555 572 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 CCDC57Q2TAC2 916 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 MS4A18Q3C1V0 323 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 SEL1L2Q5TEA6 688 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 PRAMEF20Q5VT98 475 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 C1orf189Q5VU69 101 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 ZNF343Q6P1L6 599 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 CBLN3Q6UW01 205 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 DPY19L2P2Q6ZN68 376 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 CENPUQ71F23 418 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 CBWD2Q8IUF1 395 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 MLKLQ8NB16 471 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 OR1B1Q8NGR6 318 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 PCNPQ8WW12 178 aaKnown RBP2.99□□□□□ -1.93
CLK1-214ENST00000496205 LINC00479Q96M42 142 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 VPS35Q96QK1 796 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 TESK2Q96S53 571 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 CABLES2Q9BTV7 478 aa2.99□□□□□ -1.93
CLK1-214ENST00000496205 EDEM2Q9BV94 578 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms