RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 VPS37AQ8NEZ2 397 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 JADE3Q92613 823 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 ARL8AQ96BM9 186 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 MOAP1Q96BY2 351 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 CHMP6Q96FZ7 201 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 ATP6V1G3Q96LB4 118 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 GALNT9Q9HCQ5 603 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 NEUROD4Q9HD90 331 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 PNPLA3Q9NST1 481 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 ZCCHC3Q9NUD5 404 aaKnown RBP13.05□□□□□ -0.32
BRCA1-218ENST00000489037 NTMQ9P121 344 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 WIF1Q9Y5W5 379 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 CACNA1DQ01668 2161 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 SNNO75324 88 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-218ENST00000489037 SOX30O94993 753 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 IL33O95760 270 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 C6orf47O95873 294 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 KRT16P08779 473 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 ACVR2AP27037 513 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 PTPN6P29350 595 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 EVI2BP34910 448 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 PTGDSP41222 190 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 CCT3P49368 545 aaKnown RBP13.04□□□□□ -0.32
BRCA1-218ENST00000489037 CLNS1AP54105 237 aaKnown RBP13.04□□□□□ -0.32
BRCA1-218ENST00000489037 C21orf58P58505 322 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 FNDC7Q5VTL7 733 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 SPATA19Q7Z5L4 167 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 PLCZ1Q86YW0 608 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 RIMKLAQ8IXN7 391 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 PM20D2Q8IYS1 436 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 OR4K17Q8NGC6 315 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 OR56A1Q8NGH5 318 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 OR14L1PQ8NHC6 308 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 ASB5Q8WWX0 329 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 RND1Q92730 232 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 FAM120BQ96EK7 910 aaKnown RBP13.04□□□□□ -0.32
BRCA1-218ENST00000489037 RMND5BQ96G75 393 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-218ENST00000489037 DMRTA2Q96SC8 542 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 UBQLN3Q9H347 655 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 VIPAS39Q9H9C1 493 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 HHATLQ9HCP6 504 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 PPP4R1LQ9P1A2 415 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 MARCOQ9UEW3 520 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-218ENST00000489037 FAF1Q9UNN5 650 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-218ENST00000489037 ABCG2Q9UNQ0 655 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 PCDHGB3Q9Y5G1 929 aa13.04□□□□□ -0.32
BRCA1-218ENST00000489037 KLF2Q9Y5W3 355 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-218ENST00000489037 FAM47E-STBD1D6RA91 191 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 ADAM10O14672 748 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 KLF11O14901 512 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 SCO2O43819 266 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 NKX2-2O95096 273 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 CLDN14O95500 239 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 PTGER4P35408 488 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 SOAT1P35610 550 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 DIO3P55073 304 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 TP53BP2Q13625 1128 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 DPY19L1Q2PZI1 675 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 C1orf185Q5T7R7 199 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 ANXA8L1Q5VT79 327 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 NXNQ6DKJ4 435 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 MFSD12Q6NUT3 480 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 B3GNT6Q6ZMB0 384 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 CAMKMTQ7Z624 323 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 COX18Q8N8Q8 333 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 OR10Q1Q8NGQ4 319 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 LRRC8CQ8TDW0 803 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 CA5BP1Q8WTZ4 195 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 DYDC1Q8WWB3 177 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 PIK3R3Q92569 461 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 ZNF75CPQ92670 426 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-218ENST00000489037 SDCCAG3Q96C92 435 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 NTNG2Q96CW9 530 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 TBL1XR1Q9BZK7 514 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 RUBCNLQ9H714 662 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 CHST11Q9NPF2 352 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 SERHLQ9NQF3 203 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 FAM120CQ9NX05 1096 aaKnown RBP13.03□□□□□ -0.32
BRCA1-218ENST00000489037 SPRR3Q9UBC9 169 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 TNFRSF10DQ9UBN6 386 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 DKKL1Q9UK85 242 aa13.03□□□□□ -0.32
BRCA1-218ENST00000489037 PCNX3Q9H6A9 2034 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 GXYLT2A0PJZ3 443 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 AHRRA9YTQ3 701 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 HMGB1P1B2RPK0 211 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-218ENST00000489037 HMGN2P05204 90 aaKnown RBP13.02□□□□□ -0.33
BRCA1-218ENST00000489037 HPGDP15428 266 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 HTR1EP28566 365 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 LCN1P31025 176 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 KIR3DL1P43629 444 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 OCRLQ01968 901 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 PMPCAQ10713 525 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 LASP1Q14847 261 aaKnown RBP13.02□□□□□ -0.33
BRCA1-218ENST00000489037 EIPR1Q53HC9 387 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 EMC4Q5J8M3 183 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 WIPI1Q5MNZ9 446 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-218ENST00000489037 SP5Q6BEB4 398 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-218ENST00000489037 OR4F3Q6IEY1 312 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 OGFOD2Q6N063 350 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 YRDCQ86U90 279 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms