RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 IL18R1Q13478 541 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 TFDP1Q14186 410 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 INAQ16352 499 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 TMEM52BQ4KMG9 183 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 LEG1Q6P5S2 330 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 WASH2PQ6VEQ5 465 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 GCNT7Q6ZNI0 430 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 CYS1Q717R9 158 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 BCORP1Q8N888 145 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 Q8N9G6 341 aaPredicted RBP2.44□□□□□ -2.02
CD46-215ENST00000488596 NFAM1Q8NET5 270 aaPredicted RBP2.44□□□□□ -2.02
CD46-215ENST00000488596 ANKRD20A12PQ8NF67 263 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 ZPLD1Q8TCW7 415 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 VN1R17PQ8TDU5 208 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 GIPC3Q8TF64 312 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 PPP1R16AQ96I34 528 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 RWDD1Q9H446 243 aaPredicted RBP2.44□□□□□ -2.02
CD46-215ENST00000488596 VAT1LQ9HCJ6 419 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 PRR34Q9NV39 138 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 C1orf123Q9NWV4 160 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 UTP6Q9NYH9 597 aaKnown RBP2.44□□□□□ -2.02
CD46-215ENST00000488596 ATXN10Q9UBB4 475 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 Q9UF83 564 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 DUSP12Q9UNI6 340 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 FOXJ3Q9UPW0 622 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 MGAT4BQ9UQ53 548 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.44□□□□□ -2.02
CD46-215ENST00000488596 AGRNO00468 2067 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 TRBV7-9A0A0J9YWB2 115 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 RGSL1A5PLK6 1076 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 PPIHO43447 177 aaKnown RBP2.43□□□□□ -2.02
CD46-215ENST00000488596 LANCL1O43813 399 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 MBD3O95983 291 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 DNAH10OSP0CZ25 163 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 FASP25445 335 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 PTBP1P26599 531 aaKnown RBP eCLIP2.43□□□□□ -2.021e-8■■□□□ 11.8
CD46-215ENST00000488596 CYLC1P35663 651 aaPredicted RBP2.43□□□□□ -2.02
CD46-215ENST00000488596 ACVR1BP36896 505 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 PTGFRP43088 359 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 ALDH3B2P48448 385 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 FNTAP49354 379 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 ERVPABLB-1P60509 514 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 CXCL6P80162 114 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 IL9RQ01113 521 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 DPYSQ14117 519 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 TRIP10Q15642 601 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 CGB2Q6NT52 195 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 Q6ZR54 194 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 ADCK1Q86TW2 530 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 VPS36Q86VN1 386 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 ERICH1Q86X53 443 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 MISPQ8IVT2 679 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 CERS5Q8N5B7 392 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 UBE2Q2Q8WVN8 375 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 GTSF1Q8WW33 167 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 ELMO2Q96JJ3 720 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 WRAP53Q9BUR4 548 aaKnown RBP2.43□□□□□ -2.02
CD46-215ENST00000488596 HCAR1Q9BXC0 346 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 CCSER1Q9C0I3 900 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 GPN2Q9H9Y4 310 aaPredicted RBP2.43□□□□□ -2.02
CD46-215ENST00000488596 SLC2A6Q9UGQ3 507 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 EXOSC1Q9Y3B2 195 aaKnown RBP2.43□□□□□ -2.02
CD46-215ENST00000488596 GON4LQ3T8J9 2241 aa2.43□□□□□ -2.02
CD46-215ENST00000488596 GRIN2DO15399 1336 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 IGLV3-10A0A075B6K4 115 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 FBLL1A6NHQ2 334 aaKnown RBP2.42□□□□□ -2.02
CD46-215ENST00000488596 ZSCAN5BA6NJL1 495 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 SDHDO14521 159 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 GPAA1O43292 621 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 TRIM16O95361 564 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 DIRAS3O95661 229 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 JCHAINP01591 159 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 GIG44P09565 113 aaPredicted RBP2.42□□□□□ -2.02
CD46-215ENST00000488596 SDC1P18827 310 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 XRCC1P18887 633 aaPredicted RBP2.42□□□□□ -2.02
CD46-215ENST00000488596 CYP2F1P24903 491 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 GDF1P27539 372 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 CCND2P30279 289 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 CDH5P33151 784 aaPredicted RBP2.42□□□□□ -2.02
CD46-215ENST00000488596 MDH2P40926 338 aaKnown RBP2.42□□□□□ -2.02
CD46-215ENST00000488596 SLC25A1P53007 311 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 POLR2FP61218 127 aaKnown RBP2.42□□□□□ -2.02
CD46-215ENST00000488596 PLOD1Q02809 727 aaPredicted RBP2.42□□□□□ -2.02
CD46-215ENST00000488596 HSF2Q03933 536 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 PUDPQ08623 228 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 ASAH1Q13510 395 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 SERTAD2Q14140 314 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 CDKN3Q16667 212 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 LGSNQ5TDP6 509 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 C12orf60Q5U649 245 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 ZNF57Q68EA5 555 aaPredicted RBP2.42□□□□□ -2.02
CD46-215ENST00000488596 LHFPL4Q7Z7J7 247 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 PARGQ86W56 976 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 EFCAB13Q8IY85 973 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 FBXL16Q8N461 479 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 TFB1MQ8WVM0 346 aaKnown RBP2.42□□□□□ -2.02
CD46-215ENST00000488596 C18orf25Q96B23 403 aaPredicted RBP2.42□□□□□ -2.02
CD46-215ENST00000488596 VSTM2LQ96N03 204 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 OR5M11Q96RB7 305 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 TESK2Q96S53 571 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms