RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 YARS2Q9Y2Z4 477 aaKnown RBP8.96□□□□□ -0.98
SND1-213ENST00000486037 ATG4BQ9Y4P1 393 aa8.96□□□□□ -0.98
SND1-213ENST00000486037 NUP214P35658 2090 aaPredicted RBP8.96□□□□□ -0.98
SND1-213ENST00000486037 CMYA5Q8N3K9 4069 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 PKD1L1Q8TDX9 2849 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 B2RBV5 119 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 WWP2O00308 870 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 NDUFS4O43181 175 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 TLX2O43763 284 aaPredicted RBP8.95□□□□□ -0.98
SND1-213ENST00000486037 CLEC3AO75596 197 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 ATP5HO75947 161 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 IL2RAP01589 272 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 FPR1P21462 350 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 PTX3P26022 381 aaPredicted RBP8.95□□□□□ -0.98
SND1-213ENST00000486037 HNRNPH1P31943 449 aaKnown RBP8.95□□□□□ -0.98
SND1-213ENST00000486037 GRK3P35626 688 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 AHRP35869 848 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 PIGAP37287 484 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 PHEXP78562 749 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 ACSM2AQ08AH3 577 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 CUL3Q13618 768 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 DEPDC1Q5TB30 811 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 KHDRBS2Q5VWX1 349 aaKnown RBP8.95□□□□□ -0.98
SND1-213ENST00000486037 ACSM2BQ68CK6 577 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 PLXDC2Q6UX71 529 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 QSOX2Q6ZRP7 698 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 ASRGL1Q7L266 308 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 LACC1Q8IV20 430 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 METTL4Q8N3J2 472 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 MEIOBQ8N635 442 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 KRTCAP2Q8N6L1 136 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 C9orf106Q8NAJ2 232 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 B3GNT7Q8NFL0 401 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 CLHC1Q8NHS4 586 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 RP9Q8TA86 221 aaKnown RBP8.95□□□□□ -0.98
SND1-213ENST00000486037 ASB15Q8WXK1 588 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 RCN3Q96D15 328 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 CMTM5Q96DZ9 223 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 METTL2AQ96IZ6 378 aaKnown RBP8.95□□□□□ -0.98
SND1-213ENST00000486037 F2RL3Q96RI0 385 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 SORBS1Q9BX66 1292 aaKnown RBP8.95□□□□□ -0.98
SND1-213ENST00000486037 ZNF717Q9BY31 904 aaPredicted RBP8.95□□□□□ -0.98
SND1-213ENST00000486037 LRMDAQ9H2I8 198 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 PRM3Q9NNZ6 103 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 SLC52A3Q9NQ40 469 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 MRGBPQ9NV56 204 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 SIRT5Q9NXA8 310 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 TMED5Q9Y3A6 229 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 MED12Q93074 2177 aa8.95□□□□□ -0.98
SND1-213ENST00000486037 RYR3Q15413 4870 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 MGAM2Q2M2H8 2515 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 TENM1Q9UKZ4 2725 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 LRIT2A6NDA9 550 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 LRRC3CA6NJW4 275 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 C4orf51C9J302 202 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 RTCAO00442 366 aaKnown RBP8.94□□□□□ -0.98
SND1-213ENST00000486037 NR5A2O00482 541 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 FBP2O00757 339 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 PLPP1O14494 284 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 PCDH7O60245 1069 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 GALR3O60755 368 aaPredicted RBP8.94□□□□□ -0.98
SND1-213ENST00000486037 HNRNPCL1O60812 293 aaKnown RBP8.94□□□□□ -0.98
SND1-213ENST00000486037 SLC22A3O75751 556 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 SEMA3DO95025 777 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 SERPIND1P05546 499 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 PRPS2P11908 318 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 PAX1P15863 534 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 IL10P22301 178 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 JAK1P23458 1154 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 CTSSP25774 331 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 GSTM2P28161 218 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 MAPK1P28482 360 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 TIA1P31483 386 aaKnown RBP eCLIP8.94□□□□□ -0.981e-7■■■■□ 20.6
SND1-213ENST00000486037 SOX18P35713 384 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 CPOXP36551 454 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 CLDN8P56748 225 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 RPS15AP62244 130 aaKnown RBP8.94□□□□□ -0.98
SND1-213ENST00000486037 CRYZQ08257 329 aaKnown RBP8.94□□□□□ -0.98
SND1-213ENST00000486037 CYLC2Q14093 348 aaPredicted RBP8.94□□□□□ -0.98
SND1-213ENST00000486037 MAPRE2Q15555 327 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 DEFB134Q4QY38 66 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 SPIN4Q56A73 249 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 TOR1AIP1Q5JTV8 583 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 GALNT18Q6P9A2 607 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 BLOC1S3Q6QNY0 202 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 COMMD6Q7Z4G1 85 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 UBE3DQ7Z6J8 389 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 ASPGQ86U10 573 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 GPALPP1Q8IXQ4 340 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 TBC1D19Q8N5T2 526 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 ZNF321PQ8N8H1 164 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 RBM15BQ8NDT2 890 aaKnown RBP8.94□□□□□ -0.98
SND1-213ENST00000486037 TTLQ8NG68 377 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 NEIL3Q8TAT5 605 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 EGLN2Q96KS0 407 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 TSSK3Q96PN8 268 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 REG4Q9BYZ8 158 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 KLHL31Q9H511 634 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 PROK2Q9HC23 129 aa8.94□□□□□ -0.98
SND1-213ENST00000486037 ZNF701Q9NV72 531 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms