RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 PRKACGP22612 351 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 ANOS1P23352 680 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 CCNCP24863 283 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 CALML3P27482 149 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 EMDP50402 254 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 GNB1P62873 340 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF85Q03923 595 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 ELAVL3Q14576 367 aaKnown RBP3.77□□□□□ -1.81
VPS13A-211ENST00000484581 ATXN7L3Q14CW9 347 aaPredicted RBP3.77□□□□□ -1.81
VPS13A-211ENST00000484581 TPSAB1Q15661 275 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 CD226Q15762 336 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 CHI3L2Q15782 390 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 FAM76BQ5HYJ3 339 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 C10orf120Q5SQS8 335 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 TAF3Q5VWG9 929 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 BTNL3Q6UXE8 466 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 C16orf62Q7Z3J2 963 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 NUFIP2Q7Z417 695 aaKnown RBP3.77□□□□□ -1.81
VPS13A-211ENST00000484581 SLC22A9Q8IVM8 553 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 DCUN1D3Q8IWE4 304 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 CLDN19Q8N6F1 224 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF781Q8N8C0 355 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 OR52B6Q8NGF0 335 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 AKR7LQ8NHP1 331 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF519Q8TB69 540 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 PIGCQ92535 297 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 RPL3LQ92901 407 aaKnown RBP3.77□□□□□ -1.81
VPS13A-211ENST00000484581 PIWIL1Q96J94 861 aaKnown RBP3.77□□□□□ -1.81
VPS13A-211ENST00000484581 TGM7Q96PF1 710 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 F2RL3Q96RI0 385 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 SLC39A3Q9BRY0 314 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 TRIM9Q9C026 710 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 COMMD4Q9H0A8 199 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 RHOJQ9H4E5 214 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 METTL7AQ9H8H3 244 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 WDR41Q9HAD4 459 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 SPHK2Q9NRA0 654 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 DEPPQ9NTK1 212 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 SMOXQ9NWM0 555 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 MRPL39Q9NYK5 338 aaKnown RBP3.77□□□□□ -1.81
VPS13A-211ENST00000484581 THYN1Q9P016 225 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 SEC14L4Q9UDX3 406 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 ANAPC7Q9UJX3 599 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 PYGO1Q9Y3Y4 419 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 IGLON5A6NGN9 336 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 CASKO14936 926 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 STX7O15400 261 aaKnown RBP3.76□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF749O43361 778 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 IGHG1P01857 330 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 IGF1P05019 195 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 HOXB7P09629 217 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 OR9G9P0C7N8 305 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 ADORA3P0DMS8 318 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 BCKDHAP12694 445 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 NCF2P19878 526 aaPredicted RBP3.76□□□□□ -1.81
VPS13A-211ENST00000484581 LAP3P28838 519 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 STK19P49842 368 aaPredicted RBP3.76□□□□□ -1.81
VPS13A-211ENST00000484581 SUCLG1P53597 346 aaKnown RBP3.76□□□□□ -1.81
VPS13A-211ENST00000484581 HAND2P61296 217 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 FGL1Q08830 312 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 GANABQ14697 944 aaKnown RBP3.76□□□□□ -1.81
VPS13A-211ENST00000484581 UBE2V2Q15819 145 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 IMMTQ16891 758 aaKnown RBP3.76□□□□□ -1.81
VPS13A-211ENST00000484581 MUC21Q5SSG8 566 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 PRR5LQ6MZQ0 368 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 BHLHB9Q6PI77 547 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 METAP1DQ6UB28 335 aaPredicted RBP3.76□□□□□ -1.81
VPS13A-211ENST00000484581 GCNT7Q6ZNI0 430 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 STOX1Q6ZVD7 989 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 NLRP9Q7RTR0 991 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 KIAA1328Q86T90 577 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 NBPF5PQ86XG9 351 aaPredicted RBP3.76□□□□□ -1.81
VPS13A-211ENST00000484581 VSTM4Q8IW00 320 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 LRRC43Q8N309 656 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 NUP37Q8NFH4 326 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 OR5D13Q8NGL4 314 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 OR52J3Q8NH60 311 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 SH3YL1Q96HL8 342 aaPredicted RBP3.76□□□□□ -1.81
VPS13A-211ENST00000484581 C7orf34Q96L11 122 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 FAM173AQ9BQD7 235 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 TTYH2Q9BSA4 534 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 NFKBIZQ9BYH8 718 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 PKIBQ9C010 78 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 STRADBQ9C0K7 418 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 NCOR1P1Q9H4R4 102 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 IL1RL2Q9HB29 575 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 RAB18Q9NP72 206 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 PLCXD1Q9NUJ7 323 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 BARHL2Q9NY43 387 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 TAS2R16Q9NYV7 291 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 TMEM181Q9P2C4 612 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 CDH9Q9ULB4 789 aa3.76□□□□□ -1.81
VPS13A-211ENST00000484581 EXOGQ9Y2C4 368 aaKnown RBP3.76□□□□□ -1.81
VPS13A-211ENST00000484581 GRIN2DO15399 1336 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 HELTA6NFD8 242 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 MFSD2BA6NFX1 497 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 FAM74A7A6NL05 159 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF716A6NP11 495 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 HHLA1C9JL84 531 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 FCMRO60667 390 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms