RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-210	ENST00000477625	NKX2-6	A6NCS4	301 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	FAM90A27P	A6NNH2	459 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	SCAMP2	O15127	329 aa	Known RBP	11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	FADS1	O60427	444 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	TOX	O94900	526 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	IL33	O95760	270 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	EPPIN	O95925	133 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	LAMP1	P11279	417 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	EVI2B	P34910	448 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	GCK	P35557	465 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	ADH7	P40394	386 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	MAP3K8	P41279	467 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	ZFP36L2	P47974	494 aa	Known RBP	11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	SLC1A6	P48664	564 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	PRKAG1	P54619	331 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	GAS1	P54826	345 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	EMX2	Q04743	252 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	PTGR1	Q14914	329 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	VPS26B	Q4G0F5	336 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	ACSF3	Q4G176	576 aa	Predicted RBP	11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	CPTP	Q5TA50	214 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	RIPPLY2	Q5TAB7	128 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	OR5M10	Q6IEU7	315 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	SEM1	Q6ZVN7	128 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	NATD1	Q8N6N6	113 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	ZNF781	Q8N8C0	355 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	CDRT4	Q8N9R6	151 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	ACBD4	Q8NC06	268 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	NUP43	Q8NFH3	380 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	OR7A2P	Q8NGA2	310 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	OR14L1P	Q8NHC6	308 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	DTNBP1	Q96EV8	351 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	WDYHV1	Q96HA8	205 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	PRPF18	Q99633	342 aa	Known RBP	11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	C1orf50	Q9BV19	199 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	OR2B2	Q9GZK3	357 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	C20orf27	Q9GZN8	174 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	EQTN	Q9NQ60	294 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	SDHAF3	Q9NRP4	125 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	TAS2R10	Q9NYW0	307 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	FBXL2	Q9UKC9	423 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	ABCG2	Q9UNQ0	655 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	EIF3L	Q9Y262	564 aa	Known RBP	11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	RAP2C	Q9Y3L5	183 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	CACNA1C	Q13936	2221 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	PKDREJ	Q9NTG1	2253 aa		11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625		A0A1W2PRB8	838 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	HSPB2	A8KAH6	182 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	EMC8	O43402	210 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	ERLIN1	O75477	346 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	NKX2-2	O95096	273 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	KCNH1	O95259	989 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	CPN1	P15169	458 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	PRPS1L1	P21108	318 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	BGN	P21810	368 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	SRD5A2	P31213	254 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	RFX3	P48380	749 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	CLK3	P49761	638 aa	Known RBP	11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	RPL14	P50914	215 aa	Known RBP	11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	PRR5	P85299	388 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	TFF3	Q07654	80 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	MAD2L1	Q13257	205 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	STX3	Q13277	289 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	HSPB2	Q16082	182 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	SMU1	Q2TAY7	513 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	DCST1	Q5T197	706 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	ZCCHC12	Q6PEW1	402 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	SZRD1	Q7Z422	152 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	LACC1	Q8IV20	430 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	LIX1L	Q8IVB5	337 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	TRIM42	Q8IWZ5	723 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	RIMKLA	Q8IXN7	391 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	KIRREL3	Q8IZU9	778 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	KRTCAP2	Q8N6L1	136 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	GPR151	Q8TDV0	419 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	OR5P2	Q8WZ92	322 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	PIK3R3	Q92569	461 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	COQ8B	Q96D53	544 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	GIMAP5	Q96F15	307 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	MS4A4E	Q96PG1	132 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	SORT1	Q99523	831 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	PAIP2	Q9BPZ3	127 aa	Known RBP	11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	TREX2	Q9BQ50	279 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	TRIM8	Q9BZR9	551 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	ATAD3A	Q9NVI7	634 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	FAM120C	Q9NX05	1096 aa	Known RBP	11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	FLRT3	Q9NZU0	649 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	CAMK2A	Q9UQM7	478 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	ADGRG4	Q8IZF6	3080 aa		11.13	□□□□□ -0.63
PTPN7-210	ENST00000477625	GXYLT2	A0PJZ3	443 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	CD8B2	A6NJW9	211 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625		B4DXG7	233 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	SCO2	O43819	266 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	ZIC3	O60481	467 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	UTS2	O95399	124 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	IGKV1D-16	P01601	117 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	G6PD	P11413	515 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	EFNA1	P20827	205 aa	Predicted RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms