RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 PADI2Q9Y2J8 665 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 PLLPQ9Y342 182 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 HS3ST3B1Q9Y662 390 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 FASNP49327 2511 aaKnown RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 FLNCQ14315 2725 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 FOXE1O00358 373 aaPredicted RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 SOCS6O14544 535 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 UBFD1O14562 309 aaKnown RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 DNAJB6O75190 326 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 RDH16O75452 317 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 SEMA3DO95025 777 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 BMP10O95393 424 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 CLDN9O95484 217 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 ETHE1O95571 254 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 MLYCDO95822 493 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 OTCP00480 354 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 STATHP02808 62 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 EIF2S1P05198 315 aaKnown RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 ITGA5P08648 1049 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 FBLP22087 321 aaKnown RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 GSTM5P46439 218 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 CCT5P48643 541 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 DGKQP52824 942 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 SLC18A1P54219 525 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 NAA20P61599 178 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 STXBP1P61764 594 aaKnown RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 RPS15P62841 145 aaKnown RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 RAE1P78406 368 aaKnown RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 RHAGQ02094 409 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 ZNF33BQ06732 778 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 KLC1Q07866 573 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 RGS1Q08116 209 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 DMTNQ08495 405 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 CUL3Q13618 768 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 MFSD13AQ14CX5 517 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 NDUFA9Q16795 377 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 TMEM35AQ53FP2 167 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 ATP1A1-AS1Q5TC04 95 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 FAM69BQ5VUD6 431 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 KHDRBS2Q5VWX1 349 aaKnown RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 C19orf48Q6RUI8 117 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 ABHD13Q7L211 337 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 EXOC3L1Q86VI1 746 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 GALNT4Q8N4A0 578 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 METTL27Q8N6F8 245 aaPredicted RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 SNX31Q8N9S9 440 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 OR4F6Q8NGB9 312 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 HUS1BQ8NHY5 278 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 ZCCHC10Q8TBK6 192 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 ADAMTS18Q8TE60 1221 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 AGAP11Q8TF27 550 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 TLCD1Q96CP7 247 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 PHF21BQ96EK2 531 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 IP6K3Q96PC2 410 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 WDR77Q9BQA1 342 aaPredicted RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 NPLQ9BXD5 320 aaPredicted RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 SLC29A3Q9BZD2 475 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 KLHL31Q9H511 634 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 NOL11Q9H8H0 719 aaKnown RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 ABCF3Q9NUQ8 709 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 SLC17A7Q9P2U7 560 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 ZNF282Q9UDV7 671 aaPredicted RBP4.87□□□□□ -1.63
VPS45-207ENST00000477558 GRID1Q9ULK0 1009 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 STK38LQ9Y2H1 464 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 RNF11Q9Y3C5 154 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 NAALAD2Q9Y3Q0 740 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 CCL27Q9Y4X3 112 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 NBASA2RRP1 2371 aa4.87□□□□□ -1.63
VPS45-207ENST00000477558 MYO18BQ8IUG5 2567 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 TENM4Q6N022 2769 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 A0A0A6YYD5 115 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 WIPF3A6NGB9 483 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 URADA6NGE7 173 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 SMIM23A6NLE4 172 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 IDSB3KWA1 339 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 H3BQF6 201 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 SGK494L7N484 410 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 PLPP1O14494 284 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 COPEO14579 308 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 ERLIN1O75477 346 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 RBMXL2O75526 392 aaKnown RBP4.86□□□□□ -1.63
VPS45-207ENST00000477558 IGHEP01854 428 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 CSTBP04080 98 aaKnown RBP4.86□□□□□ -1.63
VPS45-207ENST00000477558 ENO1P06733 434 aaKnown RBP4.86□□□□□ -1.63
VPS45-207ENST00000477558 MYL2P10916 166 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 COX6A1P12074 109 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 HSD3B1P14060 373 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 CPA3P15088 417 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 CD53P19397 219 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 TAC1P20366 129 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 HIST1H1TP22492 207 aaPredicted RBP4.86□□□□□ -1.63
VPS45-207ENST00000477558 PRPH2P23942 346 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 ARRB2P32121 409 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 HPDP32754 393 aaPredicted RBP4.86□□□□□ -1.63
VPS45-207ENST00000477558 BSGP35613 385 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 SERPINF1P36955 418 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 CDH13P55290 713 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 PKNOX1P55347 436 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 SKP1P63208 163 aa4.86□□□□□ -1.63
VPS45-207ENST00000477558 IGLV3-21P80748 117 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms