RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 POLR1CO15160 346 aaPredicted RBP17.6■□□□□ 0.41
VARS2-209ENST00000477288 ZNF623O75123 536 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 EEDO75530 441 aaKnown RBP17.6■□□□□ 0.41
VARS2-209ENST00000477288 OXSR1O95747 527 aaPredicted RBP17.6■□□□□ 0.41
VARS2-209ENST00000477288 HTR1EP28566 365 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 CAV2P51636 162 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 RAB5BP61020 215 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 NKX3-2P78367 333 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 ZNF791Q3KP31 576 aaPredicted RBP17.6■□□□□ 0.41
VARS2-209ENST00000477288 LYSMD4Q5XG99 296 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 GPR149Q86SP6 731 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 IQCF1Q8N6M8 205 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 SHISA4Q96DD7 197 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 TMEM19Q96HH6 336 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 ST6GALNAC5Q9BVH7 336 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 FAIMQ9NVQ4 179 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 DRD1P21728 446 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 TMBIM6P55061 237 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 NPRL3Q12980 569 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 MRPL21Q7Z2W9 205 aaKnown RBP17.6■□□□□ 0.41
VARS2-209ENST00000477288 DNAJB11Q9UBS4 358 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 SCML1Q9UN30 329 aa17.6■□□□□ 0.41
VARS2-209ENST00000477288 ZNF865P0CJ78 1059 aaPredicted RBP17.59■□□□□ 0.41
VARS2-209ENST00000477288 RPS2P15880 293 aaKnown RBP17.59■□□□□ 0.41
VARS2-209ENST00000477288 FDXRP22570 491 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 CERS1P27544 350 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 ALDH3B2P48448 385 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 MANEALQ5VSG8 457 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 BORAQ6PGQ7 559 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 NRMQ8IXM6 262 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 OR5AR1Q8NGP9 310 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 TSPEARQ8WU66 669 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 TEPSINQ96N21 525 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 TRAV18A0A075B6X5 111 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 C17orf105B2RV13 164 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 F5H5K5 113 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 PRSS56P0CW18 603 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 MELKQ14680 651 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 SF3B4Q15427 424 aaKnown RBP eCLIP17.59■□□□□ 0.411e-6■■■■□ 21.7
VARS2-209ENST00000477288 ZNF551Q7Z340 670 aaPredicted RBP17.59■□□□□ 0.41
VARS2-209ENST00000477288 OR14K1Q8NGZ2 314 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 GIMAP5Q96F15 307 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 SERTAD4Q9NUC0 356 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 VDAC3Q9Y277 283 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 TMEM201Q5SNT2 666 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 PCDHB10Q9UN67 800 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 TP53TG5Q9Y2B4 290 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 GALNT1Q10472 559 aaPredicted RBP17.59■□□□□ 0.41
VARS2-209ENST00000477288 OR52B6Q8NGF0 335 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 MALSU1Q96EH3 234 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 APOOQ9BUR5 198 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 CCDC106Q9BWC9 280 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 PPIL3Q9H2H8 161 aaKnown RBP17.59■□□□□ 0.41
VARS2-209ENST00000477288 HIF1ANQ9NWT6 349 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 NUDT21O43809 227 aaKnown RBP17.59■□□□□ 0.41
VARS2-209ENST00000477288 TNFRSF1BP20333 461 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 AGTR1P30556 359 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 CCDC71LQ8N9Z2 235 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 MAL2Q969L2 176 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 MTHFD2LQ9H903 347 aaPredicted RBP17.59■□□□□ 0.41
VARS2-209ENST00000477288 ZNF160Q9HCG1 818 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 KLHL13Q9P2N7 655 aa17.59■□□□□ 0.41
VARS2-209ENST00000477288 SGK494L7N484 410 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 SLC35E2BP0CK96 405 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 HYAL4Q2M3T9 481 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 OR52N2Q8NGI0 321 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 OR1S1Q8NH92 325 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 MEPEQ9NQ76 525 aaPredicted RBP17.58■□□□□ 0.41
VARS2-209ENST00000477288 HPRP00739 348 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 CEBPBP17676 345 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 DLSTP36957 453 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 ARSDP51689 593 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 EMP2P54851 167 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 CLDN2P57739 230 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 ASCC1Q8N9N2 400 aaKnown RBP17.58■□□□□ 0.41
VARS2-209ENST00000477288 SLC2A12Q8TD20 617 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 ACTR10Q9NZ32 417 aa17.58■□□□□ 0.41
VARS2-209ENST00000477288 ANKRD34BA5PLL1 514 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 PRAMEF26H0Y7S4 382 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 BATFQ16520 125 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 FRZBQ92765 325 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 VRTNQ9H8Y1 702 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 PELI2Q9HAT8 420 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 PREBQ9HCU5 417 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 PAQR5Q9NXK6 330 aaPredicted RBP17.58■□□□□ 0.4
VARS2-209ENST00000477288 GNG13Q9P2W3 67 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 ACTL7AQ9Y615 435 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 CHD2O14647 1828 aaKnown RBP17.58■□□□□ 0.4
VARS2-209ENST00000477288 FOXD2O60548 495 aaPredicted RBP17.58■□□□□ 0.4
VARS2-209ENST00000477288 FBXO45P0C2W1 286 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 RABEPKQ7Z6M1 372 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 SLC35F2Q8IXU6 374 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 ZNF420Q8TAQ5 688 aaPredicted RBP17.58■□□□□ 0.4
VARS2-209ENST00000477288 SOBPA7XYQ1 873 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 TSPAN15O95858 294 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 MT-CO2P00403 227 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 MAOBP27338 520 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 TAP2Q03519 686 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 SSX2Q16385 188 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 SLC5A8Q8N695 610 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms