RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 RNASET2O00584 256 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MPPED1O15442 326 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 RS1O15537 224 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 KDELR3O43731 214 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 PEX1O43933 1283 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 GPR137BO60478 399 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 B4GALT4O60513 344 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TSPAN2O60636 221 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 RNASEH1O60930 286 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 N4BP1O75113 896 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 PDE5AO76074 875 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 NOL4O94818 638 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 PAPSS2O95340 614 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 LCA5LO95447 670 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TXNDC12O95881 172 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 GSTA1P08263 222 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 HAPLN1P10915 354 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 GOT1P17174 413 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 POLR2CP19387 275 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MSH3P20585 1137 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TUBG1P23258 451 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MSNP26038 577 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ITPKBP27987 946 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 LAP3P28838 519 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TACR3P29371 465 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CD40LGP29965 261 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 GNA11P29992 359 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 BDKRB2P30411 391 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 LCN1P31025 176 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 RFX3P48380 749 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CCR4P51679 360 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 PLA2G16P53816 162 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CD81P60033 236 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 B2MP61769 119 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 PSMC5P62195 406 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 SKP1P63208 163 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ZXDBP98169 803 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CDK16Q00536 496 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 OGDHQ02218 1023 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TROAPQ12815 778 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CALCOCO2Q13137 446 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 EXOSC7Q15024 291 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF124Q15973 351 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 UAP1Q16222 522 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 PHKG1Q16816 387 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ALKBH6Q3KRA9 238 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 UGT3A2Q3SY77 523 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 GPR33Q49SQ1 333 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TIGD2Q4W5G0 525 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 SBK1Q52WX2 424 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 AARS2Q5JTZ9 985 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 KIAA1755Q5JYT7 1200 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ELFN2Q5R3F8 820 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 GRTP1Q5TC63 336 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 GPR157Q5UAW9 335 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 LAIR1Q6GTX8 287 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 OR2A2Q6IF42 318 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TCTN3Q6NUS6 607 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CEP85Q6P2H3 762 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 RFWD3Q6PCD5 774 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MON1BQ7L1V2 547 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 DPY19L4Q7Z388 723 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 P4HA3Q7Z4N8 544 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CPEB2Q7Z5Q1 589 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 DTX1Q86Y01 620 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 SPNS2Q8IVW8 549 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 LRRC8AQ8IWT6 810 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MB21D2Q8IYB1 491 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 GPR65Q8IYL9 337 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 SLC38A6Q8IZM9 456 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 LGI2Q8N0V4 545 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TMEM123Q8N131 208 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 LNX2Q8N448 690 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 C1orf52Q8N6N3 182 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF781Q8N8C0 355 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ARL14EPQ8N8R7 260 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 Q8N9G6 341 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TERB1Q8NA31 727 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TEX45Q8NA69 505 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF548Q8NEK5 533 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 OR51G2Q8NGK0 314 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 OR1L4Q8NGR5 311 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 OR4L1Q8NH43 312 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CDC26Q8NHZ8 85 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 WDR36Q8NI36 951 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MARCH1Q8TCQ1 289 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MAGEC3Q8TD91 643 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 LHX4Q969G2 390 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TSACCQ96A04 125 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 FUBP1Q96AE4 644 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MRGPRFQ96AM1 343 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ECHDC3Q96DC8 303 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TM4SF19Q96DZ7 209 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 SCRN2Q96FV2 425 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF274Q96GC6 653 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TMEM19Q96HH6 336 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 GRAMD2BQ96HH9 432 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 PPP1R16AQ96I34 528 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 AMDHD1Q96NU7 426 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 DEFB118Q96PH6 123 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms