RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 KHKP50053 298 aa27.12■■□□□ 1.93
HOXB3-208ENST00000476342 ANXA11P50995 505 aaKnown RBP27.12■■□□□ 1.93
HOXB3-208ENST00000476342 TXNL4AP83876 142 aaKnown RBP27.12■■□□□ 1.93
HOXB3-208ENST00000476342 SNTA1Q13424 505 aa27.12■■□□□ 1.93
HOXB3-208ENST00000476342 UBAP2LQ14157 1087 aaKnown RBP27.12■■□□□ 1.93
HOXB3-208ENST00000476342 NMUR2Q9GZQ4 415 aa27.12■■□□□ 1.93
HOXB3-208ENST00000476342 OR51I1Q9H343 314 aa27.12■■□□□ 1.93
HOXB3-208ENST00000476342 KLRF1Q9NZS2 232 aa27.12■■□□□ 1.93
HOXB3-208ENST00000476342 NDUFAF1Q9Y375 327 aa27.12■■□□□ 1.93
HOXB3-208ENST00000476342 ZNF462Q96JM2 2506 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 A0A096LPI6 279 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 A0A0G2JMM0 328 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 A0A1W2PPB8 328 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 A0A1W2PRS3 328 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 KIR3DP1A8MWS1 328 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 SNX4O95219 450 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 ZNF24P17028 368 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 KLF10Q13118 480 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 MAPRE2Q15555 327 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 DESI1Q6ICB0 168 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 ZFP90Q8TF47 636 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 BARD1Q99728 777 aaKnown RBP27.11■■□□□ 1.93
HOXB3-208ENST00000476342 OSBPL11Q9BXB4 747 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 ANGPTL4Q9BY76 406 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 PAIP1Q9H074 479 aaKnown RBP27.11■■□□□ 1.93
HOXB3-208ENST00000476342 SERHL2Q9H4I8 314 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 EXD2Q9NVH0 621 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 BOKQ9UMX3 212 aaPredicted RBP27.11■■□□□ 1.93
HOXB3-208ENST00000476342 NINQ8N4C6 2090 aa27.11■■□□□ 1.93
HOXB3-208ENST00000476342 PRAMEF25A6NGN4 478 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 ACOT7O00154 380 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 SLC22A2O15244 555 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 ASNA1O43681 348 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 CYP4B1P13584 511 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 ALDH6A1Q02252 535 aaKnown RBP27.1■■□□□ 1.93
HOXB3-208ENST00000476342 PLGLB1Q02325 96 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 CPEB4Q17RY0 729 aaKnown RBP eCLIP27.1■■□□□ 1.93
HOXB3-208ENST00000476342 BICRALQ6AI39 1079 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 SLC30A6Q6NXT4 461 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 TNFAIP8L2Q6P589 184 aaPredicted RBP27.1■■□□□ 1.93
HOXB3-208ENST00000476342 FIGNL1Q6PIW4 674 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 RNF130Q86XS8 419 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 FAM110BQ8TC76 370 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 NR4A3Q92570 626 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 TPT1P8Q9HAU6 139 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 PROK2Q9HC23 129 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 SLC6A13Q9NSD5 602 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 PCDHB14Q9Y5E9 798 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 CAPN7Q9Y6W3 813 aa27.1■■□□□ 1.93
HOXB3-208ENST00000476342 SEC23IPQ9Y6Y8 1000 aaKnown RBP27.1■■□□□ 1.93
HOXB3-208ENST00000476342 AK1P00568 194 aa27.09■■□□□ 1.93
HOXB3-208ENST00000476342 PTPN6P29350 595 aa27.09■■□□□ 1.93
HOXB3-208ENST00000476342 LCN1P31025 176 aa27.09■■□□□ 1.93
HOXB3-208ENST00000476342 MAGEA8P43361 318 aa27.09■■□□□ 1.93
HOXB3-208ENST00000476342 CASP9P55211 416 aa27.09■■□□□ 1.93
HOXB3-208ENST00000476342 PAGE3Q5JUK9 113 aa27.09■■□□□ 1.93
HOXB3-208ENST00000476342 DCST2Q5T1A1 773 aa27.09■■□□□ 1.93
HOXB3-208ENST00000476342 LRIF1Q5T3J3 769 aa27.09■■□□□ 1.93
HOXB3-208ENST00000476342 ATAD3BQ5T9A4 648 aa27.09■■□□□ 1.93
HOXB3-208ENST00000476342 PACS2Q86VP3 889 aa27.09■■□□□ 1.93
HOXB3-208ENST00000476342 ZNF597Q96LX8 424 aa27.09■■□□□ 1.93
HOXB3-208ENST00000476342 PINLYPA6NC86 204 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 ICOSLGO75144 302 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 IGKV1D-16P01601 117 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 CD1EP15812 388 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 ATP6V1C1P21283 382 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 EVI2BP34910 448 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 RFC3P40938 356 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 GTDC1Q4AE62 458 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 PNPT1Q8TCS8 783 aaKnown RBP27.08■■□□□ 1.93
HOXB3-208ENST00000476342 TTTY12Q9BZ98 90 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 IL1RL2Q9HB29 575 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 TUBA8Q9NY65 449 aaPredicted RBP27.08■■□□□ 1.93
HOXB3-208ENST00000476342 ADAM21Q9UKJ8 722 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 ABCG2Q9UNQ0 655 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 KCNE3Q9Y6H6 103 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 SHANK1Q9Y566 2161 aa27.08■■□□□ 1.93
HOXB3-208ENST00000476342 OR12D1P0DN82 309 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 MASP1P48740 699 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 CCNJQ5T5M9 372 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 ZNF324BQ6AW86 544 aaPredicted RBP27.07■■□□□ 1.92
HOXB3-208ENST00000476342 C16orf62Q7Z3J2 963 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 SLC22A16Q86VW1 577 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 RAD21L1Q9H4I0 556 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 ZFP64Q9NPA5 681 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 TFECO14948 347 aaPredicted RBP27.07■■□□□ 1.92
HOXB3-208ENST00000476342 CLK3P49761 638 aaKnown RBP27.07■■□□□ 1.92
HOXB3-208ENST00000476342 GALNT10Q86SR1 603 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 RNF138Q8WVD3 245 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 XAGE5Q8WWM1 108 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 MIB2Q96AX9 1013 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 TMEM41AQ96HV5 264 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 JSRP1Q96MG2 331 aaPredicted RBP27.07■■□□□ 1.92
HOXB3-208ENST00000476342 SLX1AQ9BQ83 275 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 ARMCX1Q9P291 453 aa27.07■■□□□ 1.92
HOXB3-208ENST00000476342 TRIM3O75382 744 aaPredicted RBP27.06■■□□□ 1.92
HOXB3-208ENST00000476342 UTS2O95399 124 aa27.06■■□□□ 1.92
HOXB3-208ENST00000476342 PTGDSP41222 190 aa27.06■■□□□ 1.92
HOXB3-208ENST00000476342 FOXO1Q12778 655 aa27.06■■□□□ 1.92
HOXB3-208ENST00000476342 PIGWQ7Z7B1 504 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms