RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 FBXO34Q9NWN3 711 aa16.65■□□□□ 0.26
SNRPB-203ENST00000474384 SLC25A37Q9NYZ2 338 aa16.65■□□□□ 0.26
SNRPB-203ENST00000474384 CNIH4Q9P003 139 aa16.65■□□□□ 0.26
SNRPB-203ENST00000474384 CNOT11Q9UKZ1 510 aaKnown RBP16.65■□□□□ 0.26
SNRPB-203ENST00000474384 DUXAA6NLW8 204 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 B8ZZF3 427 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 KLRC4-KLRK1H3BQV0 150 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 FBP2O00757 339 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 ABCB7O75027 752 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 RASAL1O95294 804 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 KRT75O95678 551 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 OR12D1P0DN82 309 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 DNASE1L1P49184 302 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 KHKP50053 298 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 MEOX1P50221 254 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 MLLT10P55197 1068 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 RPP38P78345 283 aaKnown RBP16.64■□□□□ 0.25
SNRPB-203ENST00000474384 EFR3AQ14156 821 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 MAPRE2Q15555 327 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 PRR30Q53SZ7 412 aaPredicted RBP16.64■□□□□ 0.25
SNRPB-203ENST00000474384 COX20Q5RI15 118 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 DLEU7Q6UYE1 221 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 MSRB3Q8IXL7 192 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 DPP10Q8N608 796 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 XAGE5Q8WWM1 108 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 TMCO6Q96DC7 493 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 TAAR6Q96RI8 345 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 SECISBP2Q96T21 854 aaKnown RBP16.64■□□□□ 0.25
SNRPB-203ENST00000474384 IL1RL2Q9HB29 575 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 PROK2Q9HC23 129 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 VAPAQ9P0L0 249 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 PCDHGB3Q9Y5G1 929 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 COL6A6A6NMZ7 2263 aa16.64■□□□□ 0.25
SNRPB-203ENST00000474384 PINLYPA6NC86 204 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 CLIC1O00299 241 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 SOX30O94993 753 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 UNC5CO95185 931 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 CASP3P42574 277 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 MVDP53602 400 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 PSMD4P55036 377 aaKnown RBP16.63■□□□□ 0.25
SNRPB-203ENST00000474384 CYLC2Q14093 348 aaPredicted RBP16.63■□□□□ 0.25
SNRPB-203ENST00000474384 DCST2Q5T1A1 773 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNRPB-203ENST00000474384 GKAP1Q5VSY0 366 aaPredicted RBP16.63■□□□□ 0.25
SNRPB-203ENST00000474384 ZAR1Q86SH2 424 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 DHDDSQ86SQ9 333 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 TREML1Q86YW5 311 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 POU5F2Q8N7G0 328 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 FAM98AQ8NCA5 519 aaKnown RBP16.63■□□□□ 0.25
SNRPB-203ENST00000474384 OR2M7Q8NG81 312 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 SNRNP40Q96DI7 357 aaKnown RBP16.63■□□□□ 0.25
SNRPB-203ENST00000474384 FLRT3Q9NZU0 649 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 NTNG1Q9Y2I2 539 aa16.63■□□□□ 0.25
SNRPB-203ENST00000474384 TRBV5-3A0A0A0MS03 114 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 ANKRD33BA6NCL7 494 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 HMGN4O00479 90 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 ASNA1O43681 348 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 HS6ST1O60243 411 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 ICOSLGO75144 302 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 RFC3P40938 356 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 CRATP43155 626 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 KCNJ2P63252 427 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 NFYCQ13952 458 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 INPP5JQ15735 1006 aaPredicted RBP16.62■□□□□ 0.25
SNRPB-203ENST00000474384 INAQ16352 499 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNRPB-203ENST00000474384 MMEL1Q495T6 779 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 OR52N2Q8NGI0 321 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 DNAJB8Q8NHS0 232 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 RP9Q8TA86 221 aaKnown RBP16.62■□□□□ 0.25
SNRPB-203ENST00000474384 FAM173AQ9BQD7 235 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 G6PC3Q9BUM1 346 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 ANGPTL4Q9BY76 406 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 METTL7AQ9H8H3 244 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 EXD2Q9NVH0 621 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 TUBA8Q9NY65 449 aaPredicted RBP16.62■□□□□ 0.25
SNRPB-203ENST00000474384 KLRF1Q9NZS2 232 aa16.62■□□□□ 0.25
SNRPB-203ENST00000474384 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.62■□□□□ 0.25
SNRPB-203ENST00000474384 SPENQ96T58 3664 aaKnown RBP16.61■□□□□ 0.25
SNRPB-203ENST00000474384 C2orf72A6NCS6 295 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 PRAMEF25A6NGN4 478 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 FADS1O60427 444 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 UTS2O95399 124 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 AGR2O95994 175 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 COX4I1P13073 169 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 ETFAP13804 333 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 PTGDSP41222 190 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 ANXA11P50995 505 aaKnown RBP16.61■□□□□ 0.25
SNRPB-203ENST00000474384 STX5Q13190 355 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 GRAMD1BQ3KR37 738 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 ARHGAP11BQ3KRB8 267 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 TBCELQ5QJ74 424 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 ATAD3BQ5T9A4 648 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 REP15Q6BDI9 236 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 HEPHL1Q6MZM0 1159 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 FAM180AQ6UWF9 173 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 OLIG3Q7RTU3 272 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 PRICKLE2Q7Z3G6 844 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 C16orf62Q7Z3J2 963 aa16.61■□□□□ 0.25
SNRPB-203ENST00000474384 ANKS4BQ8N8V4 417 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms