RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 DNAJB5O75953 348 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 ATP6V1B2P21281 511 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 MLF1P58340 268 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 TLE3Q04726 772 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 VEZF1Q14119 521 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 TYW3Q6IPR3 259 aaKnown RBP17.7■□□□□ 0.42
PSPC1-203ENST00000471658 CYP2R1Q6VVX0 501 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 LRRC74BQ6ZQY2 392 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 WDR60Q8WVS4 1066 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 OMA1Q96E52 524 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 HSPBAP1Q96EW2 488 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 RASL10BQ96S79 203 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 TREX2Q9BQ50 279 aaPredicted RBP17.7■□□□□ 0.42
PSPC1-203ENST00000471658 RSPO3Q9BXY4 272 aaPredicted RBP17.7■□□□□ 0.42
PSPC1-203ENST00000471658 QRSL1Q9H0R6 528 aaKnown RBP17.7■□□□□ 0.42
PSPC1-203ENST00000471658 FLRT3Q9NZU0 649 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 NPFFR2Q9Y5X5 522 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 DMXL2Q8TDJ6 3036 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 MED13Q9UHV7 2174 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 TMEM247A6NEH6 219 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 ACOX3O15254 700 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 SOX30O94993 753 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 ALPPP05187 535 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 CRYBA2P53672 197 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 CRISP3P54108 245 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 PCBP3P57721 371 aaKnown RBP17.69■□□□□ 0.42
PSPC1-203ENST00000471658 PLCXD2Q0VAA5 305 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 BNIP2Q12982 314 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 GPR68Q15743 365 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 DECR1Q16698 335 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 LYPD8Q6UX82 237 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 ERMP1Q7Z2K6 904 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 SPPL2CQ8IUH8 684 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 SLC34A3Q8N130 599 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 SLC5A8Q8N695 610 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 FAM13CQ8NE31 585 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 ASB9Q96DX5 294 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 RAB3IPQ96QF0 476 aaPredicted RBP17.69■□□□□ 0.42
PSPC1-203ENST00000471658 ADOQ96SZ5 270 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 ZNF350Q9GZX5 532 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 LHPPQ9H008 270 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 ZBTB20Q9HC78 741 aaPredicted RBP17.69■□□□□ 0.42
PSPC1-203ENST00000471658 ANGPT4Q9Y264 503 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 WDR45Q9Y484 360 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 SNX13Q9Y5W8 968 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 URB1O60287 2271 aaKnown RBP17.69■□□□□ 0.42
PSPC1-203ENST00000471658 CENPVL1A0A0U1RR11 272 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 M0QX08 132 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 TSPAN2O60636 221 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 STX11O75558 287 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 IL33O95760 270 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 AK1P00568 194 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 OPN1SWP03999 348 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 KDELR2P33947 212 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 RNF144AP50876 292 aaPredicted RBP17.69■□□□□ 0.42
PSPC1-203ENST00000471658 CCL11P51671 97 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 RRADP55042 308 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 JMJD6Q6NYC1 403 aaPredicted RBP17.69■□□□□ 0.42
PSPC1-203ENST00000471658 TAGAPQ8N103 731 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 GALNT16Q8N428 558 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 METTL25Q8N6Q8 603 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 TNIP2Q8NFZ5 429 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 BCL2L10Q9HD36 194 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 ACTR3BQ9P1U1 418 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 KCNE5Q9UJ90 142 aa17.69■□□□□ 0.42
PSPC1-203ENST00000471658 CFAP47Q6ZTR5 3102 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 ACACAQ13085 2346 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 A0A0G2JPF8 293 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 CFAP73A6NFT4 308 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 HNRNPCL2B2RXH8 293 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 HNRNPCL3B7ZW38 293 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 HNRNPCL4P0DMR1 293 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 SOX3P41225 446 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 NRG3P56975 720 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 MAPK14Q16539 360 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 LRRC23Q53EV4 343 aaPredicted RBP17.68■□□□□ 0.42
PSPC1-203ENST00000471658 ZNF468Q5VIY5 522 aaPredicted RBP17.68■□□□□ 0.42
PSPC1-203ENST00000471658 LRRC69Q6ZNQ3 347 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 CCDC80Q76M96 950 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 DHFR2Q86XF0 187 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 PROSER1Q86XN7 944 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 ARMC10Q8N2F6 343 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 OR5M3Q8NGP4 307 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 OR10Q1Q8NGQ4 319 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 DIO2Q92813 273 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 FAM162AQ96A26 154 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 COL21A1Q96P44 957 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 SAP130Q9H0E3 1048 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 MAGEL2Q9UJ55 1249 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 YARS2Q9Y2Z4 477 aaKnown RBP17.68■□□□□ 0.42
PSPC1-203ENST00000471658 KCNMB2Q9Y691 235 aa17.68■□□□□ 0.42
PSPC1-203ENST00000471658 DOCK10Q96BY6 2186 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 UGT2B11O75310 529 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 OR6B1O95007 311 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 CYP4B1P13584 511 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 ATP6V1C1P21283 382 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 FBXW4P57775 412 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 HPCAP84074 193 aa17.67■□□□□ 0.42
PSPC1-203ENST00000471658 TRAP1Q12931 704 aaKnown RBP17.67■□□□□ 0.42
PSPC1-203ENST00000471658 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.67■□□□□ 0.422e-7■■■■■ 45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms