RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 GPATCH1Q9BRR8 931 aaKnown RBP14.78□□□□□ -0.04
COL9A3-208ENST00000469802 GATA5Q9BWX5 397 aaPredicted RBP14.78□□□□□ -0.04
COL9A3-208ENST00000469802 TUBB1Q9H4B7 451 aa14.78□□□□□ -0.04
COL9A3-208ENST00000469802 ANKZF1Q9H8Y5 726 aa14.78□□□□□ -0.04
COL9A3-208ENST00000469802 LRTM1Q9HBL6 345 aa14.78□□□□□ -0.04
COL9A3-208ENST00000469802 RASSF1Q9NS23 344 aa14.78□□□□□ -0.04
COL9A3-208ENST00000469802 DDX18Q9NVP1 670 aaKnown RBP14.78□□□□□ -0.04
COL9A3-208ENST00000469802 C1orf109Q9NX04 203 aa14.78□□□□□ -0.04
COL9A3-208ENST00000469802 DNAJB12Q9NXW2 375 aaKnown RBP14.78□□□□□ -0.04
COL9A3-208ENST00000469802 FLRT3Q9NZU0 649 aa14.78□□□□□ -0.04
COL9A3-208ENST00000469802 DKKL1Q9UK85 242 aa14.78□□□□□ -0.04
COL9A3-208ENST00000469802 CBLCQ9ULV8 474 aa14.78□□□□□ -0.04
COL9A3-208ENST00000469802 A6NNC1 897 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 CLCA1A8K7I4 914 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 SLC28A1O00337 649 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 AZIN1O14977 448 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 HCRTR2O43614 444 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 TBX19O60806 448 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 SEC22BO75396 215 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 RCBTB2O95199 551 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 TMIGD3P0DMS9 266 aaPredicted RBP14.77□□□□□ -0.05
COL9A3-208ENST00000469802 NEFHP12036 1026 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 SDC1P18827 310 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 DPP4P27487 766 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 MAP3K8P41279 467 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 FOXF2Q12947 444 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 PDE7AQ13946 482 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 KANK2Q63ZY3 851 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 AAGABQ6PD74 315 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 WNT2BQ93097 391 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 APOPT1Q96IL0 206 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 SFXN2Q96NB2 322 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 TM9SF2Q99805 663 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 SFXN3Q9BWM7 321 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 RTN4RQ9BZR6 473 aa14.77□□□□□ -0.05
COL9A3-208ENST00000469802 FAM120CQ9NX05 1096 aaKnown RBP14.77□□□□□ -0.05
COL9A3-208ENST00000469802 C2CD3Q4AC94 2353 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 ABCA4P78363 2273 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 EEF1E1-BLOC1S5C9J1V9 151 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 PDPK1O15530 556 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 EEF1E1O43324 174 aaKnown RBP14.76□□□□□ -0.05
COL9A3-208ENST00000469802 RGS14O43566 566 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 SCO2O43819 266 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 TRIM13O60858 407 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 IL33O95760 270 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 NUDT17P0C025 328 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 FRKP42685 505 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-208ENST00000469802 STARP49675 285 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 AGFG1P52594 562 aaKnown RBP14.76□□□□□ -0.05
COL9A3-208ENST00000469802 DGKQP52824 942 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 DSCR4P56555 118 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-208ENST00000469802 SRYQ05066 204 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 GAB1Q13480 694 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 DAZAP2Q15038 168 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-208ENST00000469802 DECR1Q16698 335 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 ZNF385BQ569K4 471 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 SH2D4BQ5SQS7 431 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 ZNF551Q7Z340 670 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-208ENST00000469802 TRABD2AQ86V40 505 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 RIBC1Q8N443 379 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-208ENST00000469802 BANPQ8N9N5 519 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 OR2M3Q8NG83 312 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 NINJ1Q92982 152 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 POLDIP3Q9BY77 421 aaKnown RBP14.76□□□□□ -0.05
COL9A3-208ENST00000469802 CLEC4MQ9H2X3 399 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-208ENST00000469802 Q9N2J8 555 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 NTMQ9P121 344 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 PPP4R1LQ9P1A2 415 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 DNAJC15Q9Y5T4 150 aa14.76□□□□□ -0.05
COL9A3-208ENST00000469802 ZNF469Q96JG9 3925 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-208ENST00000469802 TTC36A6NLP5 189 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 LSM1O15116 133 aaKnown RBP14.75□□□□□ -0.05
COL9A3-208ENST00000469802 CD1EP15812 388 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 RPL38P63173 70 aaKnown RBP14.75□□□□□ -0.05
COL9A3-208ENST00000469802 HSPB3Q12988 150 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 GANABQ14697 944 aaKnown RBP14.75□□□□□ -0.05
COL9A3-208ENST00000469802 ZNHIT3Q15649 155 aaPredicted RBP14.75□□□□□ -0.05
COL9A3-208ENST00000469802 BCL2A1Q16548 175 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 UGT3A2Q3SY77 523 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 ANKRD26P1Q6NSI1 321 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 PLXDC2Q6UX71 529 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 KIF18BQ86Y91 864 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 OR4K17Q8NGC6 315 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 OR2W6PQ8NHA6 318 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 GFM2Q969S9 779 aaKnown RBP14.75□□□□□ -0.05
COL9A3-208ENST00000469802 CIDECQ96AQ7 238 aaPredicted RBP14.75□□□□□ -0.05
COL9A3-208ENST00000469802 CXXC4Q9H2H0 198 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 ACBD3Q9H3P7 528 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 REEP4Q9H6H4 257 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 LGALS13Q9UHV8 139 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 RPH3AQ9Y2J0 694 aaPredicted RBP14.75□□□□□ -0.05
COL9A3-208ENST00000469802 TMED5Q9Y3A6 229 aa14.75□□□□□ -0.05
COL9A3-208ENST00000469802 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 IGLV3-32A0A0A0MS00 114 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 TUBAL3A6NHL2 446 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 TMEM233B4DJY2 109 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 NPHS1O60500 1241 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 TNFSF13O75888 250 aa14.74□□□□□ -0.05
COL9A3-208ENST00000469802 TGM6O95932 706 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms