RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 YOD1Q5VVQ6 348 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF605Q86T29 641 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 LACC1Q8IV20 430 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ZDHHC21Q8IVQ6 265 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF619Q8N2I2 560 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF321PQ8N8H1 164 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF615Q8N8J6 731 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ADAMTS18Q8TE60 1221 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 XAGE5Q8WWM1 108 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 CDS1Q92903 461 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 SDCCAG3Q96C92 435 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 EFHD1Q9BUP0 239 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 COL25A1Q9BXS0 654 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 QRSL1Q9H0R6 528 aaKnown RBP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 AKIRIN1Q9H9L7 192 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 C3orf14Q9HBI5 128 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 GIN1Q9NXP7 522 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 P2RX2Q9UBL9 471 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 CTSFQ9UBX1 484 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 KCNE5Q9UJ90 142 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 CLCA2Q9UQC9 943 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 DTNAQ9Y4J8 743 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 SPACA6W5XKT8 324 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 A0A1W2PNU3 283 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-208ENST00000468300 PMS2P1A4D2B8 440 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 FFAR1O14842 300 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 SLITRK5O94991 958 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 RASAL1O95294 804 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 H6PDO95479 791 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 GSTT2P0CG29 244 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 GSTT2BP0CG30 244 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 FGF5P12034 268 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 FCGR1AP12314 374 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF28P17035 718 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 ATP6V1C1P21283 382 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 SSTR4P31391 388 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 ARL4DP49703 201 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 DIO1P49895 249 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 DUSP3P51452 185 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-208ENST00000468300 PSG6Q00889 435 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 PPP1R8Q12972 351 aaKnown RBP7.68□□□□□ -1.18
BRCA1-208ENST00000468300 NRF1Q16656 503 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 NHSL2Q5HYW2 709 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 B3GNT6Q6ZMB0 384 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 FRRS1Q6ZNA5 592 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 QSOX2Q6ZRP7 698 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 HMGN2P46Q86SG4 172 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 SLC30A8Q8IWU4 369 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 CBR4Q8N4T8 237 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 OR52R1Q8NGF1 315 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 RHBDD1Q8TEB9 315 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 TSLPQ969D9 159 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 TPD52L3Q96J77 140 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 NDC1Q9BTX1 674 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 DNAJB9Q9UBS3 223 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 CLEC4AQ9UMR7 237 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 ASCC3Q8N3C0 2202 aaKnown RBP7.68□□□□□ -1.18
BRCA1-208ENST00000468300 KIF26BQ2KJY2 2108 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 J3KTA2 159 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 SUV39H1O43463 412 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 DPM1O60762 260 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 CST1P01037 141 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 CCL4P13236 92 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 NT5EP21589 574 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 CBX5P45973 191 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 LIMS1P48059 325 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 KCNJ5P48544 419 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 ARSFP54793 590 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 RPP38P78345 283 aaKnown RBP7.68□□□□□ -1.18
BRCA1-208ENST00000468300 CHRNEQ04844 493 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 GK3PQ14409 553 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 ARHGAP11BQ3KRB8 267 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 AADACL4Q5VUY2 407 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 TYW3Q6IPR3 259 aaKnown RBP7.68□□□□□ -1.18
BRCA1-208ENST00000468300 BHLHB9Q6PI77 547 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 NPSR1Q6W5P4 371 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 SZRD1Q7Z422 152 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 NAXDQ8IW45 347 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 VWA5B2Q8N398 1253 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 METTL25Q8N6Q8 603 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 PLPP7Q8NBV4 271 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 ICA1LQ8NDH6 482 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 CHDHQ8NE62 594 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-208ENST00000468300 LZICQ8WZA0 190 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 ARL5BQ96KC2 179 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 VSTM2LQ96N03 204 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 TRNT1Q96Q11 434 aaKnown RBP7.68□□□□□ -1.18
BRCA1-208ENST00000468300 LMF2Q9BU23 707 aaKnown RBP7.68□□□□□ -1.18
BRCA1-208ENST00000468300 RPRD1BQ9NQG5 326 aaKnown RBP7.68□□□□□ -1.18
BRCA1-208ENST00000468300 THUMPD1Q9NXG2 353 aaKnown RBP7.68□□□□□ -1.18
BRCA1-208ENST00000468300 ANGPT4Q9Y264 503 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 ZFHX4Q86UP3 3567 aa7.68□□□□□ -1.18
BRCA1-208ENST00000468300 TCRBV16S1A1N1A0A5B0 115 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 H0YJX3 145 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 H3BUI4 141 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 LDLRP01130 860 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 IGKV1D-16P01601 117 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 DCTP40126 519 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 CLDN6P56747 220 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 TUBA4AP68366 448 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms