RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 EP300Q09472 2414 aaPredicted RBP2.61□□□□□ -1.99
XRN1-206ENST00000467077 CEP250Q9BV73 2442 aa2.61□□□□□ -1.99
XRN1-206ENST00000467077 NFASCO94856 1347 aa2.61□□□□□ -1.99
XRN1-206ENST00000467077 ATG2BQ96BY7 2078 aa2.61□□□□□ -1.99
XRN1-206ENST00000467077 TENM4Q6N022 2769 aa2.61□□□□□ -1.99
XRN1-206ENST00000467077 ANK1P16157 1881 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ATMQ13315 3056 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 CELSR3Q9NYQ7 3312 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 DENND4CQ5VZ89 1909 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 PLXNB3Q9ULL4 1909 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ASH1LQ9NR48 2969 aaKnown RBP2.6□□□□□ -1.99
XRN1-206ENST00000467077 TRAV18A0A075B6X5 111 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 A0A087WWV3 80 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 A0A0U1RQK1 487 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ZNF320A2RRD8 509 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ARL5CA6NH57 179 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 E5RGE8 158 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 K7EQG2 157 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 SIGLEC5O15389 551 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ZNF749O43361 778 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 STX6O43752 255 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 MOCS2O96007 188 aaPredicted RBP2.6□□□□□ -1.99
XRN1-206ENST00000467077 CCNE2O96020 404 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 MT-ND2P03891 347 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 CCDC192P0DO97 292 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 DLATP10515 647 aaKnown RBP2.6□□□□□ -1.99
XRN1-206ENST00000467077 CCNE1P24864 410 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 SSTR1P30872 391 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 GDI1P31150 447 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 CTNNA1P35221 906 aaKnown RBP2.6□□□□□ -1.99
XRN1-206ENST00000467077 FOLH1Q04609 750 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 TRDNQ13061 729 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ANKRD20A4Q4UJ75 823 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 CEP55Q53EZ4 464 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ANKRD20A8PQ5CZ79 823 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ZNF542PQ5EBM4 170 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ANKRD20A2Q5SQ80 823 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ANKRD20A1Q5TYW2 823 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ANKRD20A3Q5VUR7 823 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 FAM46CQ5VWP2 391 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 TCEAL6Q6IPX3 200 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 CWC27Q6UX04 472 aaKnown RBP2.6□□□□□ -1.99
XRN1-206ENST00000467077 LINC00696Q6ZRV3 163 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 CATSPER4Q7RTX7 472 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 MEX3DQ86XN8 651 aaKnown RBP2.6□□□□□ -1.99
XRN1-206ENST00000467077 PLA2G4DQ86XP0 818 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 TUSC5Q8IXB3 177 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 FIBINQ8TAL6 211 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 GRK7Q8WTQ7 553 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 TCEAL3Q969E4 200 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ELSPBP1Q96BH3 223 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 TAAR6Q96RI8 345 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 HNRNPABQ99729 332 aaKnown RBP2.6□□□□□ -1.99
XRN1-206ENST00000467077 ALKBH7Q9BT30 221 aaPredicted RBP2.6□□□□□ -1.99
XRN1-206ENST00000467077 SPZ1Q9BXG8 430 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 FNDC4Q9H6D8 234 aaPredicted RBP2.6□□□□□ -1.99
XRN1-206ENST00000467077 LY9Q9HBG7 655 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 ZFP14Q9HCL3 533 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.6□□□□□ -1.99
XRN1-206ENST00000467077 ARGLU1Q9NWB6 273 aaPredicted RBP2.6□□□□□ -1.99
XRN1-206ENST00000467077 MARCH5Q9NX47 278 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 VPS18Q9P253 973 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 SATB2Q9UPW6 733 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 NSG2Q9Y328 171 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 COL12A1Q99715 3063 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 OBSL1O75147 1896 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 PTPRDP23468 1912 aa2.6□□□□□ -1.99
XRN1-206ENST00000467077 FAM208BQ5VWN6 2430 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 TSC2P49815 1807 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 IGHV3-16A0A0C4DH30 117 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 SPAARA0A1B0GVQ0 90 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 NPIPA3F8WFD2 350 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 CCER2I3L3R5 266 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 PRRG1O14668 218 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 ZNF263O14978 683 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 CTDSPLO15194 276 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 INPP4BO15327 924 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 RHOBTB1O94844 696 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 ERLIN2O94905 339 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 PLEKHA8P1O95397 391 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 CALM1P0DP23 149 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 CALM2P0DP24 149 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 CALM3P0DP25 149 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 GOT1P17174 413 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 ATP5DP30049 168 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 HOXA9P31269 272 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 RDXP35241 583 aaKnown RBP2.59□□□□□ -1.99
XRN1-206ENST00000467077 FEN1P39748 380 aaKnown RBP2.59□□□□□ -1.99
XRN1-206ENST00000467077 OR3A1P47881 315 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 NPBWR1P48145 328 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 GSK3BP49841 420 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 RIDAP52758 137 aaKnown RBP2.59□□□□□ -1.99
XRN1-206ENST00000467077 NAPAP54920 295 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 PRKCEQ02156 737 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 ACY1Q03154 408 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 SLMAPQ14BN4 828 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 PSMD5Q16401 504 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 TYSND1Q2T9J0 566 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 IQCCQ4KMZ1 466 aa2.59□□□□□ -1.99
XRN1-206ENST00000467077 C9orf66Q5T8R8 295 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms